| Protein name |
(R)-2-haloacid dehalogenase (EC 3.8.1.9)
|
| Main knot |
61 (78%)
|
| Global pLDDT |
90.43
|
| Species |
Roseimaritima ulvae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v6:
A0A5B9QX44
|
| PDB structures |
-
|
| Model length |
312
|
| AlphaFold deposition date |
2026-06-01
|
| AlphaKnot deposition date |
2026-07-09
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.05 | 61-278 | 218 | 1-60, 279-312 | 60 | 34 |
|
Knot |
Model Sequence |
MLGFGNSPIAEHEATGEIDRVYHEIRQSLRVSGVNLVFRTWAGHKNLLPVLWDSLRPNCETQIFESLADEIRHQAAEAALSLPPIHPTAAAKLGESQLFQLNKALQLYHFVNPKLLLFASTVRLALAGELPPAADTPPTESLLRVQRGVPDDMYPMTMVEEKAEDKTTRELFDDIQQTLNLDSINSDYRTMALWPNYLQAMWKELKPTISTAEYESAAERLRDRTRALVQRLPLPISLSADAVRAAGANVDKAIETSESFEQLLPGLVINIAICLRELVNDDQLSSSPWSTTSSAGLQSFSSLHVSKLSESV
|
| Protein name |
(R)-2-haloacid dehalogenase (EC 3.8.1.9)
|
| Main knot |
61 (82%)
|
| Global pLDDT |
91.03
|
| Species |
Roseimaritima ulvae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A5B9QX44
|
| PDB structures |
-
|
| Model length |
312
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.9 | 59-268 | 210 | 1-58, 269-312 | 58 | 44 |
|
Model Sequence |
MLGFGNSPIAEHEATGEIDRVYHEIRQSLRVSGVNLVFRTWAGHKNLLPVLWDSLRPNCETQIFESLADEIRHQAAEAALSLPPIHPTAAAKLGESQLFQLNKALQLYHFVNPKLLLFASTVRLALAGELPPAADTPPTESLLRVQRGVPDDMYPMTMVEEKAEDKTTRELFDDIQQTLNLDSINSDYRTMALWPNYLQAMWKELKPTISTAEYESAAERLRDRTRALVQRLPLPISLSADAVRAAGANVDKAIETSESFEQLLPGLVINIAICLRELVNDDQLSSSPWSTTSSAGLQSFSSLHVSKLSESV
|
| Protein name |
(R)-2-haloacid dehalogenase (EC 3.8.1.9)
|
| Main knot |
61 (51%)
|
| Global pLDDT |
88.22
|
| Species |
Roseimaritima ulvae
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
312
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
93.6 | 59-268 | 210 | 1-58, 269-312 | 58 | 44 |
|
Model Sequence |
MLGFGNSPIAEHEATGEIDRVYHEIRQSLRVSGVNLVFRTWAGHKNLLPVLWDSLRPNCETQIFESLADEIRHQAAEAALSLPPIHPTAAAKLGESQLFQLNKALQLYHFVNPKLLLFASTVRLALAGELPPAADTPPTESLLRVQRGVPDDMYPMTMVEEKAEDKTTRELFDDIQQTLNLDSINSDYRTMALWPNYLQAMWKELKPTISTAEYESAAERLRDRTRALVQRLPLPISLSADAVRAAGANVDKAIETSESFEQLLPGLVINIAICLRELVNDDQLSSSPWSTTSSAGLQSFSSLHVSKLSESV
|