A0A5C0SD90F1

Oligopeptide transporter, OPT family
AF4
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Information
Protein name
Oligopeptide transporter, OPT family
Main knot
52 (57%)
Global pLDDT
87.07
Species
Crassaminicella thermophila
UniProt
Structure Prediction Model
AlphaFold v4:  A0A5C0SD90
PDB structures
-
Model length
633
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.0 95-583 489 1-94, 584-633 94 50
Model Sequence
MSKSTADKQEFKPFISADKILPEFTGMSIFLGILLAVVFGAANAYLGLKVGMTISASIPAAVISMGLIRGLLKKESILENNMVQTIGSAGESLAAGAIFTLPALYIWTEEWNMGAPNLITITAIALCGGILGVLFMVPLRKALIVKEHGILPYPEGTACAEVLLAGEEGGEKAKACFTGLGIGALYKFIADGLKLFPSEIETTIPGYKGAAIGGDVLPALLGVGFIIGPRISAYMLAGAVLGWFGFIPLIANIGSMGDVIMYPASVPIKELGYWGIWNYYIRYLGAGAVAFGGIFSLIKSLPLIVQTFKEAVKDYSSGVGGNRSVRTDRDMSMKIVLIGSLAIILAMMMLPAIPVGFGGALLIAIFGFFFATVSSRIVGLVGSSSNPVSGMTIATLIITAIIFKATGNDGHAGMIGTLTVGAIICIIAAMAGDTSQDLKTGFLVGATPFKQQYGELIGAVASALAIGLVLTLLNKAWGFGSTELPAPQATLMRLVIEGVMGGNLPWALVFTGIGVGVTIELLGLPVLPIAIGLYLPIHLSTPIMVGGVIRGILDKKLKNNGGEDKSIKAKIDSGILYASGLIAGEGLVGILLAIFAVAGWKVAMNIDLGQIGGLIFFIMLAFSLVKFSILKKD
Comments
Domain Bacteria
Family Clostridiaceae
Species (Full Name) Crassaminicella thermophila
Gene FQB35_05510
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -