| Protein name |
PAS domain S-box protein
|
| Main knot |
31 (59%)
|
| Global pLDDT |
74.22
|
| Species |
Chlorobium vibrioforme
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5C4RZ96
|
| PDB structures |
-
|
| Model length |
1277
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
74.2 | 253-1219 | 967 | 1-252, 1220-1277 | 252 | 58 |
|
Model Sequence |
MPSSNQTPDEQTSRTEPGNNTELAAANQELDTLRAENAILRENALRLDMVIDSTGAGYWDWNMETGEVAMNEQWARLIGYTLEELMPTTLDTWQQHCHPDDLQKAMVLIQEHSDGKTDHYECELRMRHRDGSWIWMLDKGKITERDDKGHPKRMVGSHLDISQKKKSDSILHKRIEFEHLIATISNRLINLALEEINPVIDDILGIVAQHVHADRCYIFQFFDNNSKMNNTHEWCAEGVNPEIENLQELPTSVFSWWVEKIEDREVVYCRDVSTLPEEASAEREILEAQDIKSVLMIPLMAESKAFGFIGLDAVKEYMEWDPDTIGLLKLIGGIISNALARQKAEKLLETELNLALQLSASQSLQETLNLCLDTALDISGMDCGGIYMVDPKDHSLQLTVHKGLSERFLDATCSYPAGSRQQQLVLEGKPIYGQFQASITHKNEQARDEALKAIGVIPVLNKGRAIACMNIASHTIEHFPAASKKALETIASHIGAALLQATHEEEITETKNNLETLFNTIDDYLFIVNSDGNVIHSNRATSEALEMSYDEITGHHVLDFHPENQHATAHQNITAMLEGTGDLCMVPLQTKSGKLVPVETKITSGIWNKQPVLFGISRDVTQRLKAEQALRESEKRFRDLTELMPQPVFECSTDNIVTYANKTSYTLYGYSGSEMTAGLSMFDLCVPESRPQLREMHQRLLKGSSLESREITALTKSGDTFPATVYASAILSGKNVIGFRGVVFDLTKHKEIEAARRESELKMRIIQNYQNLLDNIPGTVYSTDSFQRFRFILSSQAEEATGYAPEEITGMPEDWASIIHMDDREEYQRACQAMESNLLPTVLTYRIFSRNGSCKWIEDRRSPIIDATGDYAGSDGILLDITDRVQTEKEKNELESQLRQAQRLETIGTLAGGIAHDFNNILTPILGYAELLEQLLEPETGLLEYVREISTASVRAKHLIGQIMTFSRIEESKHTSINPATIIDEVLKLLRPSIPATISIKTAIDRKTRNIDADASQIHQVIVNLCTNAYQAMDANSGTLQLYLREEEPSKSLREKHPDLEARPYAILEVHDTGMGMNKETLERIFEPFFSTKPVNKGTGLGLSVVHGIIKQHGGVISVASKPGKGSVFTVYLPISVGEVHEETPQALQPGTTTMHASLIFVDDEEATVKMMKTMLENKGFTVYATTSPKEALEIVRQGSKPIDLVITDLTMPEMTGITLATQLHQFNPSLPVVLITGHGNDEALVQSLDYKEIARILRKPVSFAILVQEIQQILEP
|
| Domain |
Bacteria
|
| Family |
Chlorobiaceae
|
| Species (Full Name) |
Prosthecochloris vibrioformis (Chlorobium vibrioforme)
|
| Gene |
FGF68_07790
|
| PFAM codes |
PF00072, PF00512, PF01590, PF02518, PF08447, PF08448, PF13185, PF13426
|
| InterPro codes |
 IPR000014, IPR000700, IPR001610, IPR001789, IPR003018, IPR003594, IPR003661, IPR004358, IPR005467, IPR011006, IPR013655, IPR013656, IPR029016, IPR035965, IPR036097, IPR036890
|
| PDB structures (whole Protein) |
-
|
A0A5C4RZ96