| Protein name |
Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
|
| Main knot |
945 (61%)
|
| Global pLDDT |
86.46
|
| Species |
Rhodopirellula solitaria
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5C5X1Y0
|
| PDB structures |
-
|
| Model length |
1256
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
83.8 | 552-1141 | 590 | 1-551, 1142-1256 | 551 | 115 |
|
Model Sequence |
MLAAAQAGSVCGCLSLRFPPHIFQRSNNMPHEASDSILPDLIRERILLLDGAMGTMIQRFGLSEADVRGERFADHHKDLKNFSDILCLTHPEKITDIHREYYEAGSDIVETNSFGASPVGMVEFDLPLDLVDEINHAAVRCARIAADEWTERTPDKPRFVAGSIGPTTKQLAISTEDDPAHRGATFEQMVDSYRAQVDSLVAAGVDILLPETAIDTLNLKACLFAISDFYQAGGRRVPVMASGTFGDGGRTFVSAQSVEAFWTAINHFPLLSVGMNCALGPDVMRSHIEELSHAAEIPVSCHPNAGLPNEMGEFDLGPRAMADKVGEYADNGWVNILGGCCGTTPDHIRAMSERIAGRKPKQDTVGPVYTRLSGQMPMVMRPEIPFTMVGERTNVMGSKKFARLIRDEKYEEAVEIAREQVENGATIIDVNFDEGMLDGVEAMTRFLRLIAGDHVAASVPVMIDSSKWEVLEAGLRNVQGKAIVNSISLKDGEAEFLRRARLIRQYGAAAVVMAFDEEGQAADEDSKVRICKRAYDLLTQELDFPTEDIIFDPNILTIATGMEEHNNYAVDFINAVRRIKVECPGAKTSGGVSNISFSFRGNDPVREAIHSAFLYHAVAAGLDMGIVNAGQLEVYEEVPKDLLERVEDVLLNRRADATERMLEFAETVKSGGKKKSGEDLAWREQPVAERMKHALVKGIDKYITEDTEEARQFFDRCIQVIEGPLMDGMKVVGDLFGQGKMFLPQVVKSARVMKKAVAYLEPYMEEEKRLAGTQDQAARGKFLIATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVSSEKILEEAVKQGVDMIGLSGLITPSLDEMTHVAREMKRTGFEMPLLVGGATTSAKHTAVKIAPAYDGPVIHVLDASRSVNVVERLLSKEHRDGFIAENVETQKKLVASFQGRKQTLIPYAEALEKHFETDWSTVPISKPSFTGTRVLKSIPLAEIRPYIDWSPFFSTWELKGKYPKILEDKVVGEQAKELYRDANDLLDEIIAGDLLTANAVYGFWPAASTGEDVILYTDDTRSEELTRMHFLRQQWERKGQKDYRSLADYIAPLDSGREDYLGGFAVTTGIGAMELAMKYKEELDDYKAIMVQAVADRLAEALAEKLHEQARGDWGFGQTEGLSKDELIGEKYRGIRPAAGYPACPDHTEKRTLFDLLDAEKQTGIELTSSFAMTPGAAVSGLYFGHPESRYFTVERMTKDQIESYAERKGWPLEKVERWLAPNLGY
|
| Domain |
Bacteria
|
| Family |
Pirellulaceae
|
| Species (Full Name) |
Rhodopirellula solitaria
|
| Gene |
metH CA85_44430
|
| PFAM codes |
PF00809, PF02310, PF02574, PF02607, PF02965
|
| InterPro codes |
 IPR000489, IPR003726, IPR003759, IPR004223, IPR006158, IPR011005, IPR011822, IPR033706, IPR036589, IPR036594, IPR036724, IPR037010
|
| PDB structures (whole Protein) |
-
|
A0A5C5X1Y0