| Protein name |
GAF domain-containing protein
|
| Main knot |
41 (92%)
|
| Global pLDDT |
82.61
|
| Species |
Paraburkholderia azotifigens
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5C6VM85
|
| PDB structures |
-
|
| Model length |
815
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.8 | 33-315 | 283 | 1-32, 316-815 | 32 | 500 |
|
Model Sequence |
MSNVSGVNEQHTADMARAMVDCAREPIHIPGRIQPHGFLFCVTDDGIVMQASANVALLAQKPLDEVLGKPLSEVLGGAAAPAISALASLDTEGVPLYVGSIDDPRGAAQHEARPSPLAIVVHRYQRVGFVELEPARGTTDVFSSMYPLVRTFINRLQEVQSVADLAALAAQEVQRITGYGRTLVYDFDEEGNGHVIAEALDEGYPSYMDQRFPGSDIPPQARALYVRNRIRLIADASYTPAPLVPALNPVTHAPTDLTYASLRSVSPVHVQYMKNMGTWSSMSMSIVVRGKLWGLISCHHASARVPPFEVRTACEHIAQVLSLQVEAKEDHAEAEHRLELRLRQSRLLATMANTDHFIDALANDPRELLALTNSTSAAIVFDGRIVPIGNAPDRATIEQLVAWLDTQSDDIYSTDDLAQAWGRAANPEHAGMLALSISKLFRNYVIWFRAEVVRTLKWAGDPRAKLSSLSASLSPRKSFETWTETVRGRSSPWRQAELEIAVEFRTALLGIVLGRAEELAQLALELGRANEELEGFSYTVSHDLRAPLRHIVGFADLLREMESAKLSERGKHFVERIMGAARFGGELVDDLLAFSQMGRAALRPQGVDLRALVQTLVADEQRNAGERPIDWRIGDLPQVTADPVLLHVVLWNLIENAVKFSRLHDDPNAPALIEISSRPGEGDLAGQRVVFVRDNGVGFDMRYVDKLFGVFQRLHRAEEFEGTGIGLASVRRIVERHGGKTWAEGELGKGATIFFSLPLTFTPDVNARDESATAAVARLAALSPGQPFRPVPKESSMDAGTETRTSDGANDARRE
|
| Domain |
Bacteria
|
| Family |
Burkholderiaceae
|
| Species (Full Name) |
Paraburkholderia azotifigens
|
| Gene |
FRZ40_28685
|
| PFAM codes |
PF00360, PF00512, PF01590, PF02518, PF08446
|
| InterPro codes |
 IPR001294, IPR003018, IPR003594, IPR003661, IPR005467, IPR013515, IPR013654, IPR016132, IPR029016, IPR035965, IPR036097, IPR036890, IPR043150
|
| PDB structures (whole Protein) |
-
|
A0A5C6VM85