A0A5C8DW84F1

23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB
AF4
Categories voted by users:
Information
Protein name
23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB
Main knot
31 (77%)
Global pLDDT
88.44
Species
Chitinophagaceae bacterium
UniProt
Structure Prediction Model
AlphaFold v4:  A0A5C8DW84
PDB structures
-
Model length
240
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.9 169-210 42 1-168, 211-240 168 30
Model Sequence
MVIGRQAVIAALRSGQALDRIYLDTKVQGADINEIKRLASQSGVPVNYVPAAKLNSFNAGEHEGCLAQIAKVQYHDLQEMISFVVEKGETPLFLILDGITDIRNIGGIARTAYCCGVQAIIIPDKGVGALNEDAILTSAGALEKLPVCRVNSLMKAVDELHLNGIRVYASEMKAAKNIYDCDFREPAAIVMGSEEKGIYPALLKICDEKIRIPMVTDFESLNVSVATGMILYEVMRQRIG
Comments
ESM1
Categories voted by users:
Information
Protein name
23S rRNA (Guanosine(2251)-2'-O)-methyltransferase RlmB
Main knot
31 (76%)
Global pLDDT
95.2
Species
Chitinophagaceae bacterium
UniProt
Structure Prediction Model
PDB structures
-
Model length
240
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.6 2-211 210 1-1, 212-240 1 29
Model Sequence
MVIGRQAVIAALRSGQALDRIYLDTKVQGADINEIKRLASQSGVPVNYVPAAKLNSFNAGEHEGCLAQIAKVQYHDLQEMISFVVEKGETPLFLILDGITDIRNIGGIARTAYCCGVQAIIIPDKGVGALNEDAILTSAGALEKLPVCRVNSLMKAVDELHLNGIRVYASEMKAAKNIYDCDFREPAAIVMGSEEKGIYPALLKICDEKIRIPMVTDFESLNVSVATGMILYEVMRQRIG
Comments
Domain Bacteria
Family Chitinophagaceae
Species (Full Name) Chitinophagaceae bacterium
Gene rlmB E6Q24_02305
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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