| Protein name |
Signal peptide protein
|
| Main knot |
51 (92%)
|
| Global pLDDT |
88.51
|
| Species |
Vineibacter terrae
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5C8PDI5
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A5C8PDI5: LS2++C
|
| Model length |
102
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
95.6 | 35-93 | 59 | 1-34, 94-102 | 34 | 9 |
|
Model Sequence |
MLAILVLGVGAASASAEDKIGKNCTFKGKKLWGKVQLVTSGGDLKAEVVDAFPDLKVQKVTSFPDACGKWQIVTSLPDLKVQLVSSFPDIKIQYVTTFPGKP
|
| Protein name |
Signal peptide protein
|
| Main knot |
52 (93%)
|
| Global pLDDT |
41.23
|
| Species |
Vineibacter terrae
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Structure in AlphaLasso |
A0A5C8PDI5: LS2++C
|
| Model length |
102
|
| ESM generation time |
2023-06-22: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
41.6 | 34-92 | 59 | 1-33, 93-102 | 33 | 10 |
|
Model Sequence |
MLAILVLGVGAASASAEDKIGKNCTFKGKKLWGKVQLVTSGGDLKAEVVDAFPDLKVQKVTSFPDACGKWQIVTSLPDLKVQLVSSFPDIKIQYVTTFPGKP
|
| Domain |
Bacteria
|
| Family |
Hyphomicrobiales incertae sedis
|
| Species (Full Name) |
Vineibacter terrae
|
| Gene |
FHP25_29370
|
| PDB structures (whole Protein) |
-
|
A0A5C8PDI5