A0A5F2GRB0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Cytosine permease
Main knot	3₁ (82%)
Global pLDDT	92.59
Species	Mesorhizobium sp
UniProt	A0A5F2GRB0
Structure Prediction Model	AlphaFold v4: A0A5F2GRB0
PDB structures	-
Model length	380
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.8	66-359	294	1-65, 360-380	65	21

Model Sequence

MALHLSADTLAPAVTKPQKYLFGPIADFLMLGGSAFLILPLLFLVPLEYEGLVAATMVVVAYLVNYPHFAHSYQIFYRNFGRKVSGDGYDKGLQIRYIFAGIAVPLIMSAFFAYGAATANTRLLGYATNAMFFFVGWHYVKQGYGMLMVDAVLKRKFFDDRDKKVLLVNSYAVWILAWLQTNTAVTAGKYYGLEYYTFAAPSWITDIALLVALASTAATVLMLARRWRKNGGGLPYNGIVAYVASLYLWILIARINPLWLLVVPALHSLQYLAVVWRYQTNVERDGQDAGKDPQPKILSFLGPLYRLRVLGFIVGGGALGYLGFWLIPFVLTALIPYDRQVLGSSLFFFIVLIFINVHHYFLDNVMWRRGNPEVSKYLFR

Comments

ESM1

Categories voted by users:

Information

Protein name	Cytosine permease
Main knot	3₁ (79%)
Global pLDDT	83.77
Species	Mesorhizobium sp
UniProt	A0A5F2GRB0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	380
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.4	59-359	301	1-58, 360-380	58	21

Model Sequence

Comments

Domain	Bacteria
Family	Phyllobacteriaceae
Species (Full Name)	Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1
Gene	EN863_030855
PDB structures (whole Protein)	-

A0A5F2GRB0F1

AF4

Model Sequence

ESM1

Model Sequence