A0A5J5B7Y4F1

Oligopeptide transporter 2
AF6
Categories voted by users:
Information
Protein name
Oligopeptide transporter 2
Main knot
52 (81%)
Global pLDDT
84.02
Species
Nyssa sinensis
UniProt
Structure Prediction Model
AlphaFold v6:  A0A5J5B7Y4
PDB structures
-
Structure in AlphaLasso
  A0A5J5B7Y4: LS3++-N
Model length
745
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.52 127-691 565 1-126, 692-745 126 54 Knot
Model Sequence
MASMKAASTHHPTDGENLNGDHSEEERCPVEEVALVVPETDDPSLPVMTFRTWFLGLTSCTLLIFLNTFFTYRTQPLVISAILMQIAVLPIGKFMAATLPTNQYKVLGWTFSLNPGPFNMKEHVVITVFANCGVSIGGGDAYSIGAITVMKAYYKQRLNFVCALLIVLTTQVLGYGWAGMLRKYLVYPVEMWWPSNLAMVSLFRALHEKDPKTKSMTRMRFFLVFLGVSFAYYTFPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGLGAFTLDWAGISAYHGSPLVTPWFSILNIGVGFIMFVYIIVPLCYWKFNTFDAQKFPIFSNQLFTSSGHKYDTTKILTPQYDLNVAAYEKYGKLYLSPLFALSIGSGFARFTATLTHVALFNGSDIWKQSKSAIKNVKLDIHAKLMKSYKEVPQWWFLVLLLGSIALSLLVSFVWKEDVQLPWWGMLFAFALAWIVTLPIGVLQATTNQQPGYDIIAQFIIGYVLPGKPIANLLFKIYGRTSTLHALSFLSDLKLGHYLKIPPRSMFTAQLAGTLVSGTVNLGAAWWMLGNIENICDVESLHPESPWTCPKYRVTFDASVIWGLIGPERLFGPGGLYRNLVWLFLVGAVLPVPVWILSKIFPEKKWIPLINIPVISYGFAGMPPATPTNIASWIVTGTIFNYFVFKYRKGWWQKYNYVLSAALDAGTAFMGVLLFFALQNEGRNLKWWGSEPDHCPLASCPTAPGILVQGCPVFN
Comments
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 2
Main knot
52 (76%)
Global pLDDT
84.36
Species
Nyssa sinensis
UniProt
Structure Prediction Model
AlphaFold v4:  A0A5J5B7Y4
PDB structures
-
Structure in AlphaLasso
  A0A5J5B7Y4: LS3++-N
Model length
745
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.5 134-690 557 1-133, 691-745 133 55
Model Sequence
MASMKAASTHHPTDGENLNGDHSEEERCPVEEVALVVPETDDPSLPVMTFRTWFLGLTSCTLLIFLNTFFTYRTQPLVISAILMQIAVLPIGKFMAATLPTNQYKVLGWTFSLNPGPFNMKEHVVITVFANCGVSIGGGDAYSIGAITVMKAYYKQRLNFVCALLIVLTTQVLGYGWAGMLRKYLVYPVEMWWPSNLAMVSLFRALHEKDPKTKSMTRMRFFLVFLGVSFAYYTFPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGLGAFTLDWAGISAYHGSPLVTPWFSILNIGVGFIMFVYIIVPLCYWKFNTFDAQKFPIFSNQLFTSSGHKYDTTKILTPQYDLNVAAYEKYGKLYLSPLFALSIGSGFARFTATLTHVALFNGSDIWKQSKSAIKNVKLDIHAKLMKSYKEVPQWWFLVLLLGSIALSLLVSFVWKEDVQLPWWGMLFAFALAWIVTLPIGVLQATTNQQPGYDIIAQFIIGYVLPGKPIANLLFKIYGRTSTLHALSFLSDLKLGHYLKIPPRSMFTAQLAGTLVSGTVNLGAAWWMLGNIENICDVESLHPESPWTCPKYRVTFDASVIWGLIGPERLFGPGGLYRNLVWLFLVGAVLPVPVWILSKIFPEKKWIPLINIPVISYGFAGMPPATPTNIASWIVTGTIFNYFVFKYRKGWWQKYNYVLSAALDAGTAFMGVLLFFALQNEGRNLKWWGSEPDHCPLASCPTAPGILVQGCPVFN
Comments
Domain Eukaryota
Family Nyssaceae
Species (Full Name) Nyssa sinensis
Gene F0562_027042
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
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