| Protein name |
(-)-germacrene D synthase
|
| Main knot |
Unknown (51%)
|
| Global pLDDT |
73.4
|
| Species |
weeping love grass
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5J9W2M2
|
| PDB structures |
-
|
| Model length |
971
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
73.8 | 36-850 | 815 | 1-35, 851-971 | 35 | 121 |
|
Model Sequence |
MQSSTLVNVQHRSRRYTPSPWGNFFLTHEACTQPELLSMQKKAQAVKEEVREMVLDAAASDDLVRKLDLIDALQRLGVGYHYGKEIDDVLRAVYHDKHGGSDDLYVTSLRFYLLRKHGYDVSSDVFLKFRGEQGNISSDDVNCLMTLYDAAHMRTHGEQILDSIINFNKSKLQSSIKTIFEPELAEEVRTTLETPRFRRVERVEARRYISVYEKKPTRNETILRFAKLDYNILQALYCEELKELTMWDEETTEQLPEYLKAICINILHTVNKIEEDLKHQKNKLNEFFKKMVIETAKFYHAEVKWRDEHYVPATIDEHLQVSVCSAVCMQIIIMIFISLGDVAPNEAIEWGLTFPQIIRGVSIVGRIGNDIVSHEQGSNHVASTVQTCMKQYGVTIEEANEKLRTVIEEAWMDIVEECLNRKHPMLLLGKAVNLARTMDFMYKREDAYTLSLSLKNVITSIWDQAKKMWIGRAPRSGRQRPAAPAQHSPAKLEATQHSRRQYAPSPWGDFFLTYEPCTHTELLTMKEKAQVLKEEVRRILLDAAASYDLAQKLDLIDALERLGVGYHYRKEIDEVLRAVYDDKNGGSDDLYVTSLRFYLLRRHGYAVPSVFDGNKLREKSSEVQLTLETPRCRRVQRVEARRFISVYEKKQLARHDTTILEFAKLDYNIVQVLYRKELKEHTVWWKDFTSRVDMGFARDRLVEMYFWMMAIVHEPYSSRINLTKLVLSLALIDDVYDNCTTTEQCQIFTEAIQRWDEMVPEQLPANMRAFYENIIGNTNEIVEELKLKNNNNAEMDAATCYHAEVKWRDGRYVPTDIEEHLKISVKSITAMHTATLAFVSLGDVTTREVVEWAFSYPKIIRAVSILARISNDIMSHEREQASKHMASTVQTCMKQYGVTAQEANEKLRGKIESAWMDIIKEFLDHQEHSIVLLEKVVAFAQSIDFIYKHEEAYTLSSNHEDTLTSLYVKSV
|
A0A5J9W2M2
IPR001906