A0A5K8AHV2F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (76%)
Global pLDDT
91.78
Species
Desulfosarcina ovata subsp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A5K8AHV2
PDB structures
-
Structure in AlphaLasso
Model length
248
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.3 169-220 52 1-168, 221-248 168 28
Model Sequence
MALRRFYIPPEMAGAVQPEITGSDAAHICRVLRLASGDTVELFDGTGRGYTARIVTCSPKRVAVAIEENFAMLAESPVHITLAQGVLKDRKMDALIRQLTELGIDTWMPFYAARSIPVPGSKGLGPRLARWEKIALEAVKQCRRGCLPQIAPVDDFDAVIASSASFDLKIIFWEETLGAFRIPDTAPRQPHQILVVVGPEGGFSADEIQRARTHGFLTAGLGTRILRAETATLAACTLVQYCFGDMGR
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (77%)
Global pLDDT
93.66
Species
Desulfosarcina ovata subsp
UniProt
Structure Prediction Model
PDB structures
-
Structure in AlphaLasso
Model length
248
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.7 169-219 51 1-168, 220-248 168 29
Model Sequence
MALRRFYIPPEMAGAVQPEITGSDAAHICRVLRLASGDTVELFDGTGRGYTARIVTCSPKRVAVAIEENFAMLAESPVHITLAQGVLKDRKMDALIRQLTELGIDTWMPFYAARSIPVPGSKGLGPRLARWEKIALEAVKQCRRGCLPQIAPVDDFDAVIASSASFDLKIIFWEETLGAFRIPDTAPRQPHQILVVVGPEGGFSADEIQRARTHGFLTAGLGTRILRAETATLAACTLVQYCFGDMGR
Comments
Domain Bacteria
Family Desulfobacteraceae
Species (Full Name) Desulfosarcina ovata subsp. ovata
Gene yggJ DSCOOX_54450
PFAM codes  PF04452,  PF20260
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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