A0A5M9MI64 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (84%)
Global pLDDT	80.39
Species	Aspergillus tanneri
UniProt	A0A5M9MI64
Structure Prediction Model	AlphaFold v4: A0A5M9MI64
PDB structures	-
Model length	370
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.4	43-270	228	1-42, 271-370	42	100

Model Sequence

MNQGVKRQRLNAPVSIVYGVNSFANDPCRSAATQGKEAWNGFCELESEPALFNVMLREFGVKGVKVQEVVSLDEEMMAFLNKPVYGLIFLFRWREDDPNKQEASCPEGLWFANQTTSNACASVALLNIVNNIEGIELGENLQHFKNFTMPFTPALRGDAINNFEFVKRIHNSFARKMDMLNSDLLLKYEATSKRSRLGKYTQDENEMHAGFHFIAFVPALGTVWKFDGLERQPQALGHYTSDDDWLDLVKPNIRTKMEEYEEGQIEFSILSLTQDPLPNLIGGSISESTFAEQLQEAIIGPDESYGLTRERIDQSEIPTACEEEYGTLSNEDLLQHRQHLVAQQQSLRITIREEQQSLQADDDYAAGRSI

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (81%)
Global pLDDT	76.62
Species	Aspergillus tanneri
UniProt	A0A5M9MI64
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	370
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					53.2	43-270	228	1-42, 271-370	42	100

Model Sequence

Comments

Domain	Eukaryota
Family	Aspergillaceae
Species (Full Name)	Aspergillus tanneri
Gene	ATNIH1004_006935
PFAM codes	PF01088
InterPro codes	IPR001578, IPR036959, IPR038765
PDB structures (whole Protein)	-

A0A5M9MI64F1

AF4

Model Sequence

ESM1

Model Sequence