A0A5N5HPS1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Aspartic proteinase CDR1-like
Main knot	3₁ (67%)
Global pLDDT	76.53
Species	Pyrus ussuriensis
UniProt	A0A5N5HPS1
Structure Prediction Model	AlphaFold v4: A0A5N5HPS1
PDB structures	-
Structure in AlphaLasso	A0A5N5HPS1: L₀
Model length	395
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.4	11-161	151	1-10, 162-395	10	234

Model Sequence

MASADVVTMILIIYVILYYSSTIKVVNSDVSDGTPQSELRRDKEGGEGAQLMKLSLGTPPYEIYAVADTGSMMLWTQCEPCPNCYKQKNPKFDPKKSPSYATLPCTAQECSHANDTGYTSCSKDDQKICNYNYTYMDDSITQGVMSKETITFGSSSGKPVSFKDVKFSHCLVPFDPDHPNDASIMSFGRGSEVSGEGVVSSPLITKHCKNQYFVTVEGISVGEQFVPFNSSGSVSKGNMYLESGTRVTMLPQDFYGRSVEQVKKTMNSSLKPVEVNDESGTLLCYNTTENLKAPLFTVHFDGGAKLQLSPAQTFYQNKQHKLHCFGTLNSSHTIGEGIGLYGSYAQSNFLNGFDLEKMLVSFKAADCRKTSSTSSSSPNIILQVVEMFFKYPTTL

Comments

ESM1

Categories voted by users:

Information

Protein name	Aspartic proteinase CDR1-like
Main knot	5₂ (57%)
Global pLDDT	74.99
Species	Pyrus ussuriensis
UniProt	A0A5N5HPS1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A5N5HPS1: L₀
Model length	395
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					49.1	1-395	395		0	0

Model Sequence

Comments

Domain	Eukaryota
Family	Rosaceae
Species (Full Name)	Pyrus ussuriensis x Pyrus communis
Gene	D8674_007384
PFAM codes	PF14541, PF14543
InterPro codes	IPR021109, IPR032799, IPR032861, IPR033121, IPR034161
PDB structures (whole Protein)	-

A0A5N5HPS1F1

AF4

Model Sequence

ESM1

Model Sequence