| Protein name |
Amino acid permease
|
| Main knot |
41 (51%)
|
| Global pLDDT |
83.28
|
| Species |
Salmonella newport
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A5U9KX29
|
| PDB structures |
-
|
| Model length |
272
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
84.9 | 21-239 | 219 | 1-20, 240-272 | 20 | 33 |
|
Model Sequence |
MELDRSLKARHLTMISVGGVIGAGFFLGAGAAITRTGPSVVLAYLAGGIITLFIMVLLAEMAVAKPVSGSFEHYARTAFGPWCGFMTGWTYWLAFLIGPASEAIAAGTFLNMWFPGVPVWLFCLVIASSLTVINMVGVHFFGEVEFWLSLVKVVALLAFIVAGCYSLGLDTASPARISNLTDNGSFFSAGIPGFLGAMLMVIFSFGGTEAIGTAAGESEDPQRDIPKTLRGTVVRILLLYVGSMTVLLFILPWQQAGISSSPYVEAAGILGG
|
| Protein name |
Amino acid permease
|
| Main knot |
41 (54%)
|
| Global pLDDT |
93.05
|
| Species |
Salmonella newport
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
272
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
95.5 | 20-247 | 228 | 1-19, 248-272 | 19 | 25 |
|
Model Sequence |
MELDRSLKARHLTMISVGGVIGAGFFLGAGAAITRTGPSVVLAYLAGGIITLFIMVLLAEMAVAKPVSGSFEHYARTAFGPWCGFMTGWTYWLAFLIGPASEAIAAGTFLNMWFPGVPVWLFCLVIASSLTVINMVGVHFFGEVEFWLSLVKVVALLAFIVAGCYSLGLDTASPARISNLTDNGSFFSAGIPGFLGAMLMVIFSFGGTEAIGTAAGESEDPQRDIPKTLRGTVVRILLLYVGSMTVLLFILPWQQAGISSSPYVEAAGILGG
|
A0A5U9KX29
IPR004840