| Protein name |
Peptide transporter
|
| Main knot |
52 (61%)
|
| Global pLDDT |
87.88
|
| Species |
uncultured Paludibacter
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A653ADR0
|
| PDB structures |
-
|
| Model length |
669
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
88.1 | 108-608 | 501 | 1-107, 609-669 | 107 | 61 |
|
Model Sequence |
MEHKQEKPAGLPENAYRELKEGEEYKPVMPAGGKFPEVTKWSVAMGLLMAVIFSAAAYSGLKIGQVFEAAIPISIIAVGASAAARKKNALGQNVIIQSIGAASGVIVAGAVFTIPGLYILQAKYPEIQINFWQIFFSSLLGGFLGILFLIPFRKYFVKDMHGKLPFPEATATTEILMTGEKGGSQAKLLILSGLIGGLFDFCFSAFKLWSEEVTTRILPYGEVLANKVKMVLKFNVSALIFSFGYLVGLRYALIITVGSLLSWLVFIPLVNEIGNLAASVGGGANPFAAMSPEDIFKAYVRPIGIGAIAMAGIIGIIKSSGVIGSAFKLAFNMGEKTHAEVKPERTQKDLKMSFVMLFIFFTLVAVFIFFIFGIKITLIQAVVALITVTVISFLFTTVAANAIAIVGTNPVSGMTLMTLILSSVILVSVGLKGWQGMVSALIIGGVVCTALSMAGGFVTDLKIGYWLGTTPAKQESYKFLGTLVSAATVGAVIFILNQAYGFTASATHPNPMVAPQANAMAAIIEPLMSGQGVSWVLLGVGAIISVLINWLGISPLAFALGMFIPLPLNTPLVVGGLLNHWFTKSSKNAKLANARVQRGILIASGFIAGAALFGVIGAFIIFFTNNTEALNLGVWTNPEGIGAQITAVVAFIALIAYFVWESFRAKEED
|
| Domain |
Bacteria
|
| Family |
Paludibacteraceae
|
| Species (Full Name) |
uncultured Paludibacter sp
|
| Gene |
TRIP_D310198
|
| PFAM codes |
PF03169
|
| PDB structures (whole Protein) |
-
|
A0A653ADR0