| Protein name |
Plasmid recombination enzyme
|
| Main knot |
81 (58%)
|
| Global pLDDT |
90.16
|
| Species |
Butyricicoccus sp
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A658JQ88
|
| PDB structures |
-
|
| Model length |
273
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
90.5 | 30-245 | 216 | 1-29, 246-273 | 29 | 28 |
|
Model Sequence |
MTKAIDRFQQYLINGRYQKLRQLEQRQKETRQFIRKQLQDKEGKRFEFKKVGYVGRFVRKIETYTDHKALIEELTNYLSVSSMIQLDVLNFNPASDDVKTLVEPFSLPVDTYVKPTLNKAGKAYVNVYKGYYDNYPTILGYMEEVAAYAIREEKEKAAKKEYEQLMSDLKSELTKSVKTNYGTLSVIQKKPKYDLLALLNEFDEEFLLEQCQVKLTEFHELIEMGILERTFLEPFQQIVDVRVDFILQSIESEQRAFEFMEQRKKALQQLLAS
|
| Protein name |
Plasmid recombination enzyme
|
| Main knot |
81 (56%)
|
| Global pLDDT |
88.72
|
| Species |
Butyricicoccus sp
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
273
|
| ESM generation time |
2023-06-26: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
87.9 | 28-250 | 223 | 1-27, 251-273 | 27 | 23 |
|
Model Sequence |
MTKAIDRFQQYLINGRYQKLRQLEQRQKETRQFIRKQLQDKEGKRFEFKKVGYVGRFVRKIETYTDHKALIEELTNYLSVSSMIQLDVLNFNPASDDVKTLVEPFSLPVDTYVKPTLNKAGKAYVNVYKGYYDNYPTILGYMEEVAAYAIREEKEKAAKKEYEQLMSDLKSELTKSVKTNYGTLSVIQKKPKYDLLALLNEFDEEFLLEQCQVKLTEFHELIEMGILERTFLEPFQQIVDVRVDFILQSIESEQRAFEFMEQRKKALQQLLAS
|
| Domain |
Bacteria
|
| Family |
Clostridiaceae
|
| Species (Full Name) |
Butyricicoccus sp. 1XD8-22
|
| Gene |
D7X33_17705
|
| PDB structures (whole Protein) |
-
|
A0A658JQ88