A0A659R4A5 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Cadaverine/lysine antiporter
Main knot	4₁ (65%)
Global pLDDT	89.01
Species	Salmonella enterica subsp
UniProt	A0A659R4A5
Structure Prediction Model	AlphaFold v4: A0A659R4A5
PDB structures	-
Model length	267
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.6	21-242	222	1-20, 243-267	20	25

Model Sequence

MSSVKKIGLFACTGVVAGNMMGSGIALLPANLASIGGFAIWGWVISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPIPAGIACIAIVWLFTFINMLGGAWVSRLTTIGLFLVLIPVVLTAVAGWHWFDIATYHANWNTSTTTDSHAIVKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTALAGIIYIAATQVIAGMFPASVMASSGAPFAISTSTILG

Comments

ESM1

Categories voted by users:

Information

Protein name	Cadaverine/lysine antiporter
Main knot	4₁ (63%)
Global pLDDT	90.65
Species	Salmonella enterica subsp
UniProt	A0A659R4A5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	267
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.7	21-242	222	1-20, 243-267	20	25

Model Sequence

Comments

Domain	Bacteria
Family	Enterobacteriaceae
Species (Full Name)	Salmonella enterica subsp. enterica serovar Wilhelmsburg
Gene	C9F09_07390
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A659R4A5F1

AF4

Model Sequence

ESM1

Model Sequence