A0A660M787 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (58%)
Global pLDDT	81.22
Species	Candidatus Saccharimonas
UniProt	A0A660M787
Structure Prediction Model	AlphaFold v4: A0A660M787
PDB structures	-
Model length	278
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.3	26-259	234	1-25, 260-278	25	19

Model Sequence

MTTQQTQQESKLGWRSLTGLVIGSMIGAGIFNLVRNTAESAGPLATIIAWLVTGVGMVFLVLSFRNLAEKRPDLDAGIYSYAEAGFGKYVGFNSAWGYWISAWIGNIAYAVTAFSALGYFFPQLFADGQNWASAIGMSVLLWGVHCLILRGVRTASAVNLLITIAKIVPLMVFLVAIIAAFKLDIFSKDLWGLAGSNFSLGSVLSQVQSMMIVTVWVFIGVEGAVVFSGRAKQRSDVVKATFIGFAAVLALYVLMTVLAFGVATQPELAGLKDPAMAL

Comments

ESM1

Categories voted by users:

Information

Protein name	Amino acid permease
Main knot	4₁ (60%)
Global pLDDT	89.24
Species	Candidatus Saccharimonas
UniProt	A0A660M787
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	278
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.8	26-259	234	1-25, 260-278	25	19

Model Sequence

Comments

Domain	Bacteria
Family	Candidatus Saccharimonadaceae
Species (Full Name)	Candidatus Saccharimonas sp
Gene	D8B38_06710
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

A0A660M787F1

AF4

Model Sequence

ESM1

Model Sequence