A0A660N708F1

TraB/GumN family protein
AF6
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (54%)
Global pLDDT
85.9
Species
Kingella sp
UniProt
Structure Prediction Model
AlphaFold v6:  A0A660N708
PDB structures
-
Model length
345
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
85.97 5-328 324 1-4, 329-345 4 17 Knot
86.18 20-216 197 1-19, 217-345 19 129 Knot
Model Sequence
MNSKHLKLLIALIALLVLANIGIQFWQPHPATAPQTAKKPRVQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADDIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
Comments
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (57%)
Global pLDDT
85.98
Species
Kingella sp
UniProt
Structure Prediction Model
AlphaFold v4:  A0A660N708
PDB structures
-
Model length
345
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.6 13-314 302 1-12, 315-345 12 31
Model Sequence
MNSKHLKLLIALIALLVLANIGIQFWQPHPATAPQTAKKPRVQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADDIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
62 (54%)
Global pLDDT
86.47
Species
Kingella sp
UniProt
Structure Prediction Model
PDB structures
-
Model length
345
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
58.0 12-288 277 1-11, 289-345 11 57
Model Sequence
MNSKHLKLLIALIALLVLANIGIQFWQPHPATAPQTAKKPRVQTTLPAPKQYAQTPFDWHSVKLESNLWKISKAGQPDSYLLGTIHIGKTDARISPALAQLITQNQKIITEVADDIPESTRQSLVQAMLSDTPLSQKMGSRAFNALKQHIRSYPNAEPLLQSLDQLHPWAVLLNTLSLRETDESNETGADKLITAQATQQHKPLGSLESHIEALAYFHILPEELIIAGLNDWAQRPKKDNDKIIFEAYAHGDFARIPALLQKDTEFNPESSLSPAQQQQFADWFVQQMIVARNRNWLPKIQAEAAKQPTLFAVGTAHLVGNQGLIMLLRHNGYQVEPMPKLAVWQ
Comments
Domain Bacteria
Family Neisseriaceae
Species (Full Name) Kingella sp
Gene D8B42_04900
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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