A0A663LPP8 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Queuine tRNA-ribosyltransferase accessory subunit 2 (Queuine tRNA-ribosyltransferase domain-containing protein 1)
Main knot	3₁ (62%)
Global pLDDT	88.65
Species	Burrowing owl
UniProt	A0A663LPP8
Structure Prediction Model	AlphaFold v4: A0A663LPP8
PDB structures	-
Model length	366
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.9	225-359	135	1-224, 360-366	224	7

Model Sequence

MAQLALPALAELHDVLEEYKEGAAKFIGMPDTVLYCSLHDPVTPCPSGYNTNKAVSLWGNSGRMEMTASKFMDIQRAIQPDWFQCISDGDTISGEAGRKRAKKSVDRSLSFLDVCLQLLEKSPELQGSVMFGAIEGGDILEERLRSARETAKRPVGGFLLDGFQGCAMARETKLKLIASVTAELPEDKPRIIHGVGKPDEVLECIERGVDIFESFFPFQVTERGCALVFSYDCHPDPEAAVLEQNGAQDLERNGAEDNRDEISKADPEMTPFEIFLKDKRYHDDFGPVLEGCTCYCCQRHTRAYVHHLLVTNELLAGVLLMMHNFQHYFSFFSAIRDALRDNKLDQLKKCVFKQVLQGPTNAKPGQ

Comments

ESM1

Categories voted by users:

Information

Protein name	Queuine tRNA-ribosyltransferase accessory subunit 2 (Queuine tRNA-ribosyltransferase domain-containing protein 1)
Main knot	3₁ (51%)
Global pLDDT	89.26
Species	Burrowing owl
UniProt	A0A663LPP8
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	366
ESM generation time	2023-06-26: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					86.6	203-353	151	1-202, 354-366	202	13

Model Sequence

Comments

Domain	Eukaryota
Family	Strigidae
Species (Full Name)	Athene cunicularia (Burrowing owl) (Speotyto cunicularia)
Gene	QTRT2
PFAM codes	PF01702
InterPro codes	IPR002616, IPR028592, IPR036511
PDB structures (whole Protein)	-

A0A663LPP8F1

AF4

Model Sequence

ESM1

Model Sequence