A0A667ZYV6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (70%)
Global pLDDT	96.38
Species	pinecone soldierfish
UniProt	A0A667ZYV6
Structure Prediction Model	AlphaFold v4: A0A667ZYV6
PDB structures	-
Model length	395
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.5	29-290	262	1-28, 291-395	28	105

Model Sequence

MNGPVDGKYDLSNHDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRAHVDYQKVVRDTIRHIGYDTSDKGFDYKTCNVLVALEEQSPDIAQGVHIDRMESDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKMAELRRNGTVPWLRPDSKTQVTVHYTQENGAVIPKRVHTVVISVQHDDFVSLEEQKQILREKVIKAVVPSKYLDENTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVAYAIGVAHPLSISLFTYGSSQKNEKELLQIVNKNFDLRPGVIVRDLDLKRPIYQKTACYGHFGRKEFPWEVPKNLNF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (68%)
Global pLDDT	82.85
Species	pinecone soldierfish
UniProt	A0A667ZYV6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	395
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.7	26-286	261	1-25, 287-395	25	109

Model Sequence

Comments

Domain	Eukaryota
Family	Holocentridae
Species (Full Name)	Myripristis murdjan (pinecone soldierfish)
Gene	LOC115378364
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A667ZYV6F1

AF4

Model Sequence

ESM1

Model Sequence