A0A669PK78 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (89%)
Global pLDDT	80.9
Species	Common pheasant
UniProt	A0A669PK78
Structure Prediction Model	AlphaFold v4: A0A669PK78
PDB structures	-
Model length	389
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.1	69-281	213	1-68, 282-389	68	108

Model Sequence

MTRNRSSRSLPAPALPHHRDARCGVRRGACREGSGAPRPRGVAGWRHREPEGSARAAAMAGGSSAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCAHQDIRLGETLSEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKEEDAFHFVSYVPVNGRLYELDGLREGPIDLGSCNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQRIAELQRQLAEEEPMDTDQSSNMLSSIQSEVAKYQMLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNAKKVQEAK

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (84%)
Global pLDDT	82.63
Species	Common pheasant
UniProt	A0A669PK78
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	389
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					59.5	70-281	212	1-69, 282-389	69	108

Model Sequence

Comments

Domain	Eukaryota
Family	Phasianidae
Species (Full Name)	Phasianus colchicus (Common pheasant)
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR033837, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A669PK78F1

AF4

Model Sequence

ESM1

Model Sequence