A0A671SRB6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (81%)
Global pLDDT	83.89
Species	Sinocyclocheilus anshuiensis
UniProt	A0A671SRB6
Structure Prediction Model	AlphaFold v4: A0A671SRB6
PDB structures	-
Model length	351
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.9	9-221	213	1-8, 222-351	8	130

Model Sequence

MAGSAGEWCLMESDPGVFTELIKGFGCKGAQVEEIWSMEPENFENLKPVHGLIFLFKWQPGEEPAGSIVQDSRLEEIFFTKQVINNACATQAIVSVLLNCTHPDMHLGETLTEFKEFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKEEDAFHFVSYVPANGRLYELDGLREGPIDLGVCNEDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEKKIVELQAQLTEEEPMDTDQSGNHVSSIQSEIAKYQLQIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLIPLVEKVKNAFSKTALRVRAQNGFSVGTAFFAMISVRTHTFT

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (75%)
Global pLDDT	85.09
Species	Sinocyclocheilus anshuiensis
UniProt	A0A671SRB6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	351
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.7	10-221	212	1-9, 222-351	9	130

Model Sequence

Comments

Domain	Eukaryota
Family	Cyprinidae
Species (Full Name)	Sinocyclocheilus anshuiensis
Gene	LOC107664699
PFAM codes	PF01088, PF18031
InterPro codes	IPR001578, IPR017390, IPR033837, IPR036959, IPR038765, IPR041507
PDB structures (whole Protein)	-

A0A671SRB6F1

AF4

Model Sequence

ESM1

Model Sequence