A0A672RNA1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (71%)
Global pLDDT	95.95
Species	Dianchi golden-line fish
UniProt	A0A672RNA1
Structure Prediction Model	AlphaFold v4: A0A672RNA1
PDB structures	-
Model length	395
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.5	31-287	257	1-30, 288-395	30	108

Model Sequence

SVQLLANMEGLNDVHDDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRANVDYQNIVRDTIKHIGYDNSEKGFDYKTCNVLVALEQQSPDIAQGVHIDRHEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKMAELRRDGTIPWLRPDSKTQVTVHYKQENGAVIPLRVHTVVISVQHDDYISLEEQQRILKEKVIKAVVPAKYLDDKTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISLFTYGSSEKTEKELLQIVNKNFDLRPGVIVRDLNLKRPIYQSTACYGHFGRSEFPWEVMLVV

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (68%)
Global pLDDT	80.2
Species	Dianchi golden-line fish
UniProt	A0A672RNA1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	395
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					66.4	28-286	259	1-27, 287-395	27	109

Model Sequence

Comments

Domain	Eukaryota
Family	Cyprinidae
Species (Full Name)	Sinocyclocheilus grahami (Dianchi golden-line fish) (Barbus grahami)
Gene	LOC107570529
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A672RNA1F1

AF4

Model Sequence

ESM1

Model Sequence