A0A672U4A7 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (95%)
Global pLDDT	74.8
Species	Kakapo
UniProt	A0A672U4A7
Structure Prediction Model	AlphaFold v4: A0A672U4A7
PDB structures	-
Model length	335
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.1	215-261	47	1-214, 262-335	214	74

Model Sequence

MKYLSLVEKPVNKPIQKLMSSETPIESPEEPKENTMSPEVPDVEGKVKCSGSPVERQEAGLNMEECLELMSKRQRKKLLKQKQWEEQKDLRRQKRKEKRQKRKQERQSKLDSNNEGNDRKRVRREVVPSTLRLIVDCSFDDLMVLKDVKKLHKQIQRCYAENRKAFHPVQFYLTSHGGQLKSNMNENDKGWVNWKDIQIRTEHYTELIKKEDLVYLTSDSPDVLSELDEKKAYVIGGLVDHNHHKGITYQKAVEQGIGHAQLPLGNFVKMNSRKVLAVNHVFEIILAYLEKRDWKEAFVSVLPQRKGAVPLGEANDSSKRALSGKEDEDNDLESN

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (93%)
Global pLDDT	86.87
Species	Kakapo
UniProt	A0A672U4A7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	335
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					75.4	215-261	47	1-214, 262-335	214	74

Model Sequence

Comments

Domain	Eukaryota
Family	Psittacidae
Species (Full Name)	Strigops habroptila (Kakapo)
Gene	TRMT10A
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

A0A672U4A7F1

AF4

Model Sequence

ESM1

Model Sequence