A0A674A8Z1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (70%)
Global pLDDT	93.97
Species	Brown trout
UniProt	A0A674A8Z1
Structure Prediction Model	AlphaFold v4: A0A674A8Z1
PDB structures	-
Structure in AlphaLasso	A0A674A8Z1: L₀
Model length	398
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.4	32-288	257	1-31, 289-398	31	110

Model Sequence

KFHKFNGHVLGGGPLSKDSFMYSCPLSILCSSPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSRANVDYQKVVRDTIQHIGYDNSDKGFDYKTCNVLVALEQQSPDIAQGVHIDRKEEDMGAGDQGLMFGYATDETEECMPLTIVLAHKLNSKMAELRRNGTIPWLRPDSKTQVTVHYEQEHGAVIPIRVHTVVISVQHDDFIGLEEQKEVLKEKVIKVVVPAKYLDDKTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISVFTYGSSQKSERELLKIVNKNFDLRPGVIVRELNLKRPIYQKTACYGHFGRSEFTWEVPKELNY

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (74%)
Global pLDDT	79.61
Species	Brown trout
UniProt	A0A674A8Z1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A674A8Z1: L₀
Model length	398
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					60.1	28-362	335	1-27, 363-398	27	36

Model Sequence

Comments

Domain	Eukaryota
Family	Salmonidae
Species (Full Name)	Salmo trutta (Brown trout)
Gene	LOC115193555
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A674A8Z1F1

AF4

Model Sequence

ESM1

Model Sequence