A0A674PB13 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (75%)
Global pLDDT	96.56
Species	Japanese pufferfish
UniProt	A0A674PB13
Structure Prediction Model	AlphaFold v4: A0A674PB13
PDB structures	-
Model length	394
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.5	32-285	254	1-31, 286-394	31	109

Model Sequence

LRGPVGGSFHISLDGSFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRANVDYQKVVRDAIKQIGYDNSDKGFDYKTCNVLVALEQQSPDIAQGVHVDRKEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKMAELRRNGTIPWLRPDSKTQVTVHYEQKEGAVIPKRVHTIVISVQHDDYISLEEQKKVLKEKVIKDVVPAKYLDDKTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAQPLSISVFTYGSSKKTESELLQIVNKNFDLRPGVIVRELNLKRPIYQQTAAYGHFGRDGFSWEVPKQLVF

Comments

ESM1

Categories voted by users:

Information

Protein name	S-adenosylmethionine synthase (EC 2.5.1.6)
Main knot	3₁ (68%)
Global pLDDT	81.32
Species	Japanese pufferfish
UniProt	A0A674PB13
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	394
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.4	25-289	265	1-24, 290-394	24	105

Model Sequence

Comments

Domain	Eukaryota
Family	Tetraodontidae
Species (Full Name)	Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Gene	LOC101076112
PFAM codes	PF00438, PF02772, PF02773
InterPro codes	IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
PDB structures (whole Protein)	-

A0A674PB13F1

AF4

Model Sequence

ESM1

Model Sequence