| Protein name |
EGF-like domain-containing protein
|
| Main knot |
Unknown (79%)
|
| Global pLDDT |
71.57
|
| Species |
Phytophthora rubi
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6A3L9H4
|
| PDB structures |
-
|
| Structure in AlphaLasso |
 A0A6A3L9H4: LS9--++-++--N LS6---++-C LS6-+-+--N LS5---++C LS4-++-C LS3--+C L0 L-2N L-1C L+1C
|
| Model length |
770
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
76.2 | 218-582 | 365 | 1-217, 583-770 | 217 | 188 |
|
Model Sequence |
MSLVDGVCTCDGGRTEVSAGVCQCIGGQELVDGVCECPPRQSLVNGVCSCPQGEHYEGGLCVPTCYWKENNAGLACAWSDPTKDYLKLKEDCKVNSPVPKDTYVNDGRTNENDAAETNPVVSITATRDGDLVGVTHKASWKDYALTPDTLENEVTFSSFGVFDLSLTATNYRYPATCTGCIAVVDDFPPTAKDQCKTTNDQATPVLYSTANLDDAIAEEAKFTAFYSPDNVLNNGAYDSATGANERCDDSSASMQEFFAASPSQLASVATTCFDADFVTDLLDGVPSASPLSLTDLERNTLQCTRCCTKSITLQEYYYDYQCGTALQDTEKKTASSDSCSFGYCLKMPASTLVTVTAGITETADEKTSVTIAGLPTPITPGSKDIHRSITCTSFSQGCTYTPTLGELFEHSSNWGVSVPDTYNVDDFVFWRYSVGTESWNSWDDSALLSFTEPETAVYVEAWTHCGQVLMDSFTVVLHPHSSRDICSGFNDLWSELTAFPRTVESHICAYPDSDFVLMQFAYDNELHSGLTHDEGTVQGKYTDVNCYVTLAESGAVDTVTEGQVPLSWTPGANGHIQVTKDLALELVHDPETSENTDVRVKCDFTFTYFDSSTKVETCPHSFTITACDRPVVETYGEEAVCKAGECLSPSGMPGPFEACQGSVFTTVNSVAQEKTLGGECCDECSKTLVCEPLPESSATGGVQRCVPASAPELLVMALRGEGDWSQASTPSVVVAFLGVSALVAVVALVVVKRRSARATIEDDAYYPLLG
|
| Domain |
Eukaryota
|
| Family |
Peronosporaceae
|
| Species (Full Name) |
Phytophthora rubi
|
| Gene |
PR001_g15631 PR003_g16335
|
| PDB structures (whole Protein) |
-
|
A0A6A3L9H4