A0A6A4DJP7 | AlphaKnot 2.0

AF4

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Information

Protein name	Aa_trans domain-containing protein
Main knot	4₁ (71%)
Global pLDDT	74.63
Species	Phytophthora rubi
UniProt	A0A6A4DJP7
Structure Prediction Model	AlphaFold v4: A0A6A4DJP7
PDB structures	-
Model length	294
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.4	24-244	221	1-23, 245-294	23	50

Model Sequence

MARSALFTMEDAKAAFNLFCCVYGIGTLGMPGNFSLAGPVIAVIAMAFMAFANTYSSVAICRVMLLAPRSVKTYGDLGEWCMGKPGRYLSVISQMANCLLVPCVFLVLGGTLLDGLFPGAFSSTTWIILMALTCLPVCLVPTLKEGAGAAFAGCMGTLIADIIGVSVVMYGMRGHPSVPSPELSFKQVAGAFGNLALAYGAGIVIPALQRQHSDPTRMPRVVGVTIGFISCCFLVLASTAYSSVGCQISGNLLWSIYPDSETGLTTLGFPRTGVPSSSPTSSCSCTSRSPSPSS

Comments

ESM1

Categories voted by users:

Information

Protein name	Aa_trans domain-containing protein
Main knot	4₁ (71%)
Global pLDDT	85.46
Species	Phytophthora rubi
UniProt	A0A6A4DJP7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	294
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.2	23-244	222	1-22, 245-294	22	50

Model Sequence

Comments

Domain	Eukaryota
Family	Peronosporaceae
Species (Full Name)	Phytophthora rubi
Gene	PR003_g21010
PFAM codes	PF01490
InterPro codes	IPR013057
PDB structures (whole Protein)	-

A0A6A4DJP7F1

AF4

Model Sequence

ESM1

Model Sequence