A0A6A5ZGU0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	DUF3844 domain-containing protein
Main knot	3₁ (92%)
Global pLDDT	72.95
Species	Lophiotrema nucula
UniProt	A0A6A5ZGU0
Structure Prediction Model	AlphaFold v4: A0A6A5ZGU0
PDB structures	-
Structure in AlphaLasso	A0A6A5ZGU0: L₀
Model length	394
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.6	70-197	128	1-69, 198-394	69	197

Model Sequence

MHDLWQGQIRTGAPALSPETARLVFAQRLGVSRYHSIKHVDEETVQHINKYGGPQQKLFREKHENPARVLIWIDDVEGDSLRDDITKSTVTHLPEFKISNPPASSDSERLIQDFILQAQSLPMKADPQNWAHTTGVEVEAELMKLKQTDSYNLNGYLNVFHADKNDKIPQADLAKSIANVLNGIVTWGNSRDYCVTVVLMPPSPAHSKRAAQPYGTYDLPSTLEARRDKTEMLLSPAASEPSAEPQNPNVSNLEDMPTIQISQANNSSPVLGILPSCFNSQGICEKKTHFCSGHGSCGVLHNGTGKGKDTRTRDCYACFCKADVVQVSKSSNKTTVWGGPACQKKDVSVPFWLFAGTGILLAFLISSGIGLLYSMGSEELPSVIGAGVSGPTRK

Comments

ESM1

Categories voted by users:

Information

Protein name	DUF3844 domain-containing protein
Main knot	5₁ (62%)
Global pLDDT	64.43
Species	Lophiotrema nucula
UniProt	A0A6A5ZGU0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	A0A6A5ZGU0: L₀
Model length	394
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					56.6	2-198	197	1-1, 199-394	1	196

Model Sequence

Comments

Domain	Eukaryota
Family	Lophiotremataceae
Species (Full Name)	Lophiotrema nucula
Gene	BDV96DRAFT_610977
PFAM codes	PF12955
InterPro codes	IPR024382
PDB structures (whole Protein)	-

A0A6A5ZGU0F1

AF4

Model Sequence

ESM1

Model Sequence