A0A6A6CYF9 | AlphaKnot 2.0

AF4

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Information

Protein name	Deoxyribose-phosphate aldolase
Main knot	3₁ (86%)
Global pLDDT	89.1
Species	Zasmidium cellare
UniProt	A0A6A6CYF9
Structure Prediction Model	AlphaFold v4: A0A6A6CYF9
PDB structures	-
Model length	350
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.0	251-316	66	1-250, 317-350	250	34

Model Sequence

MDEKDSANNAPSQKRRTQHDDSAPDTSKPSAVFLPAGGRSHTLSIALPGSIIANALTHDQKTSLAGQIARACAVFCVDEIVVFDDGQAEIRDPEQGGYTAFADPNFFLYHVLTYLETPPNLRKSLFPMHPDLRIAGALPSLDMPHHLRSEEWCQFREGITTGVGNGNSTLVDCGLGQRVKISDEVEVNTRVTVQLPEQRPSNPNGPITGEAVAPETPREQAGYYWGYSVRQAASLGSIFTECTFDGGYDVSIGTSERGSPLSAILESGSTSYVEPTWNHLVVVFGGVTGIEMALRADEELQAAGVSKAEEVFDFWINLVPGQGSRTIRTEEAVWVGLTGLRKLVEDRSQR

Comments

ESM1

Categories voted by users:

Information

Protein name	Deoxyribose-phosphate aldolase
Main knot	3₁ (87%)
Global pLDDT	86.43
Species	Zasmidium cellare
UniProt	A0A6A6CYF9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	350
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					83.9	251-316	66	1-250, 317-350	250	34

Model Sequence

Comments

Domain	Eukaryota
Family	Mycosphaerellaceae
Species (Full Name)	Zasmidium cellare ATCC 36951
Gene	M409DRAFT_51461
PFAM codes	PF02598
InterPro codes	IPR003750, IPR012340, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A6A6CYF9F1

AF4

Model Sequence

ESM1

Model Sequence