A0A6A8R848 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (43%)
Global pLDDT	81.8
Species	Nocardia seriolae
UniProt	A0A6A8R848
Structure Prediction Model	AlphaFold v4: A0A6A8R848
PDB structures	-
Model length	366
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					84.5	21-277	257	1-20, 278-366	20	89

Model Sequence

MGGESVRLDGNTLVLPGGVGVRFIRTLRLPEEGTHPLPPGLGEFPVRRVADYADSVPEEWAKRGGVMLPMYLREAMWLSFSAPEPAALQIGVGKVCAVSGKPWSDRLAADPQNYVVLPRQPWLDGINSGKGIIRQFVAVPLGLGATVEGQVTGDETHGGIPLQNFALNDTELARWRRAEEARRRADAERVRAITTSAPLPASPMSYSAPHSIPLGAPPPAPGSTPPRPQPGAAPRARRKANAMGLGVGGTMRQEIYKDDRPLHDWSLHPSGRIFVHLVTPPDWHHITGEAAPPSPVDRKAYTAAGLPWFDYFDSDATDLAPADSLATVAPVGDWLGDDHEPWENPTPGQIHHLGDKQGKPVEDGDW

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (66%)
Global pLDDT	74.25
Species	Nocardia seriolae
UniProt	A0A6A8R848
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	366
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.7	22-288	267	1-21, 289-366	21	78

Model Sequence

Comments

Domain	Bacteria
Family	Nocardiaceae
Species (Full Name)	Nocardia seriolae
Gene	GL303_09420
PDB structures (whole Protein)	-

A0A6A8R848F1

AF4

Model Sequence

ESM1

Model Sequence