| Protein name |
Polyketide synthase PksJ
|
| Main knot |
31 (73%)
|
| Global pLDDT |
74.08
|
| Species |
Pontiella desulfatans
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6C2U4S0
|
| PDB structures |
-
|
| Model length |
885
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
48.0 | 683-837 | 155 | 1-682, 838-885 | 682 | 48 |
|
Model Sequence |
MSVKNFPSNDPLARVDALVSRMAANQPDQPAVCFGYQRLSYRELEHRANGVAEALLERGVKSGDLVGVYMERSALMPVALLGVLKTGAAYVPMDPAYPAQRIQWMVEDATMHTMLTDAVHEETVRGFGVEPVRVDELAPSKTCPEASTDPDGLAYVIFTSGSTGRPKGVQIPHRALTNFIVSMQQVPGMTADDALLAVTTLSFDIAGLEMFLPLVAGGRLVVASKETAMDGKALLQTIEAEAITILQATPVTWKLMLAAGWDASPNLNVLCGGEAFPRDLANTLVPKAASVWNMYGPTETTIWSTCDQVAVDEGSVSIGLPIANTTVHIVDEAMKPVQDGTEGELVIGGDGLAIGYLNNPEMTAEKFTTLSGSVERIYRTGDLARYLPDGRLECLGRIDHQVKLRGFRIELGEIESALRAHEAVADAAVALYDNDGNPRLVAYLILSGGQAIDLSSSIHSWLVDRLPAYMVPSGFTLLDEFPLTPNGKLDRKALPEPVGAIPLQPGGDVDYQSETESRLAGIWRELLGYDAVPRDIDFFELGGDSIRAAQMFVGIKERFGLDLTLAVLVQASTIESLAKRIDSGGADDLAEYRSLKRIQSGSEGTVPMFWVHGGDGHVLIFRFFAENLGADVPVYAFQWTGMDGGRGEASIMEMAQAYCAELLRFLPADARTIRLGGFCVGGLVAVELAKLLKAAGVEVLDPLVIVGAPNHGAKCHIKSEPEQSPQEFKRMLEQMEKLKVVAEAEVPWEYIRPDHGGGLKGAIKQSAPYAMARRLRTEKRLRQIDREAAAGQGVDPATRQWYCGQTAVVAMIHHRNQSYDGDILYFRSGVCHGEAMGLWGWWNSPYMGFEELCNGHFEGVVIGGAHEDVLRRPETANKVRERFNA
|
| Domain |
Bacteria
|
| Family |
Pontiellaceae
|
| Species (Full Name) |
Pontiella desulfatans
|
| Gene |
pksJ PDESU_03386
|
| PFAM codes |
PF00501, PF00550, PF00975, PF13193
|
| InterPro codes |
 IPR000873, IPR001031, IPR009081, IPR010071, IPR020806, IPR020845, IPR025110, IPR029058, IPR036736, IPR045851
|
| PDB structures (whole Protein) |
-
|
A0A6C2U4S0