| Protein name |
DNA topoisomerase (EC 5.6.2.1)
|
| Main knot |
41 (79%)
|
| Global pLDDT |
90.38
|
| Species |
Teratosphaeria nubilosa
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6G1KXC3
|
| PDB structures |
-
|
| Model length |
678
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
60.2 | 496-596 | 101 | 1-495, 597-678 | 495 | 82 |
|
Model Sequence |
MAIRRVLCVAEKPSIARAVANHLGGGQVNARHVQYSQYVKNYEFNYHFPQWGNCNVTMTSVMGHLTSHDFDPQYKGWNSCDPSALFEARIDTYIEDNKKAIAENIKRQAQHCDVLFIWTDCDREGENIGTEIRKVAVEGKAALGRPQGTVRARFSNIERAHVIHAAGHPVQLDEAQANAVAARMELDLRIGASFTRNLSLSLKPMFLQHMGDNAPKVISYGSCQFPTLGFVVERYFRVKNFVPETFWSIKVMHQKDDVKVNFTWARNHLFDRMAVVILFERCLTARLARVTKVQTKPTSKWKPLPLTTVELQKCGSRFLRMDSQRVMTVAESLYTKGWISYPRTETDQFDQGMNLQALVHKQTQGGPWAQFAQGLMNGGFSQPRNGRNNDKAHPPIHPVNYVELAALTSPEERRVYEFVVRRFLACCSEDAKGSKTEISILYGSETFNTSGLTVLQRNYLDVYPYDKWTSSQQLPDFREGETFEPTEARIHEGKTTAPGYLTEPELIALMDANGIGTDATMAEHIAKIKERSYVETRGRTGQARQEGEVDIEDDDEPPTGAARGRGRGRGGARGRAGRGGANARGGATTNGVQEFVPTTLGVALIEGYENMQLEISLARPFLRKEMELKMKAICDGSKTKAQVVDETITQYRLVYGRTQQRLDALRTAVRKYVLGENG
|
| Domain |
Eukaryota
|
| Family |
Teratosphaeriaceae
|
| Species (Full Name) |
Teratosphaeria nubilosa
|
| Gene |
EJ03DRAFT_17237
|
| PFAM codes |
PF01131, PF01751
|
| InterPro codes |
 IPR000380, IPR003601, IPR003602, IPR006171, IPR013497, IPR013824, IPR013825, IPR013826, IPR023405, IPR023406, IPR034144
|
| PDB structures (whole Protein) |
-
|
A0A6G1KXC3