A0A6H9LH15 | AlphaKnot 2.0

AF4

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Information

Protein name	Sodium:solute symporter
Main knot	4₁ (62%)
Global pLDDT	87.72
Species	Flavobacterium sp
UniProt	A0A6H9LH15
Structure Prediction Model	AlphaFold v4: A0A6H9LH15
PDB structures	-
Model length	376
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.2	53-286	234	1-52, 287-376	52	90

Model Sequence

MGQIDWIVLIGTLVFIVLYGTYKARGSKNVVDYLKGGNQAKWWTIGLSVMATQASAITFLSTPGQAFHDGMGFVQFYFGLPLAMVVICLVFIPLYHRLKVFTAYEYLETRFDLKTRTLTAILFLIQRGLAAGITIFAPAIILSAVLEWNLLYLNIIIGVLVIIYTVSGGTKAVSVTQKQQMAVIMGGMLIAFLIILNYLPLDISMDKALDIAGANGKMEILDFSFDFENRYTFWSGIIGGSFLALSYFGTDQSQVQRYLSGRSVRQSQMGMIMNGLLKVPLQFFILLIGVMVFVFYQFNASPLHFNPAGVKDVMNSEYATDYQALEDHKRLIENDLRDKQIEYAKADDPSKELDLKAEILQLNKAEDSLRNHSKVL

Comments

ESM1

Categories voted by users:

Information

Protein name	Sodium:solute symporter
Main knot	4₁ (72%)
Global pLDDT	90.21
Species	Flavobacterium sp
UniProt	A0A6H9LH15
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	376
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					91.8	51-298	248	1-50, 299-376	50	78

Model Sequence

Comments

Domain	Bacteria
Family	Flavobacteriaceae
Species (Full Name)	Flavobacterium sp
Gene	DWP94_04565
PFAM codes	PF00474
InterPro codes	IPR001734, IPR038377
PDB structures (whole Protein)	-

A0A6H9LH15F1

AF4

Model Sequence

ESM1

Model Sequence