| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (78%)
|
| Global pLDDT |
90.23
|
| Species |
Bacteroidales bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6I0E9J0
|
| PDB structures |
-
|
| Model length |
230
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
89.8 | 76-130 | 55 | 1-75, 131-230 | 75 | 100 |
|
Model Sequence |
MEISFILVEPAVPENVGAAARAIKTMGFGDLRLVNPCDHLDMKARMLAHASNDILENAKVYQSFEEAIKDVDFVFATSAKQRWVKLDIIPCNELTDFIEKKGDTINSIAIVFGREESGLTNEEIALCHRVSTIPLKTQYPSLNLAQSVMIYAYTLSFLNIESPEKHKKNQNPDSLKALISKVQSVLSQIELGPDKLINGRLIERITELDAEDIKLLHSLTSALTEKIKPN
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (80%)
|
| Global pLDDT |
89.56
|
| Species |
Bacteroidales bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
230
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
98.4 | 76-130 | 55 | 1-75, 131-230 | 75 | 100 |
|
Model Sequence |
MEISFILVEPAVPENVGAAARAIKTMGFGDLRLVNPCDHLDMKARMLAHASNDILENAKVYQSFEEAIKDVDFVFATSAKQRWVKLDIIPCNELTDFIEKKGDTINSIAIVFGREESGLTNEEIALCHRVSTIPLKTQYPSLNLAQSVMIYAYTLSFLNIESPEKHKKNQNPDSLKALISKVQSVLSQIELGPDKLINGRLIERITELDAEDIKLLHSLTSALTEKIKPN
|
A0A6I0E9J0
IPR001537