| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (95%)
|
| Global pLDDT |
90.57
|
| Species |
Janthinobacterium violaceinigrum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6I1HHR1
|
| PDB structures |
-
|
| Model length |
257
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
92.8 | 90-142 | 53 | 1-89, 143-257 | 89 | 115 |
|
Model Sequence |
MNLPEINTSLFKRLRFILVETSRSGNIGAVARAMKTMGFSDLVLVNPRFPDALTDAEAVAFASGAQDILSGARIVGSIAEALEGCNYAAAVSARLREFSPPVTTPRAIAGQLAAGTELHAAVIFGNERFGLPNEIVEQCNVLINIPANPEYSSLNLSQAAQVVAYECRVAALEAAGEVPAASAIGFHGDAASLAQIDGMYAHLEQALVAIDFLDADNPKKLMPRLKRLFSRTGLETEEVNILRGIARHILAVAKKAP
|
| Protein name |
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC 2.1.1.200) (tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase) (tRNA Cm32/Um32 methyltransferase)
|
| Main knot |
31 (94%)
|
| Global pLDDT |
91.97
|
| Species |
Janthinobacterium violaceinigrum
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
257
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.9 | 91-191 | 101 | 1-90, 192-257 | 90 | 66 |
|
Model Sequence |
MNLPEINTSLFKRLRFILVETSRSGNIGAVARAMKTMGFSDLVLVNPRFPDALTDAEAVAFASGAQDILSGARIVGSIAEALEGCNYAAAVSARLREFSPPVTTPRAIAGQLAAGTELHAAVIFGNERFGLPNEIVEQCNVLINIPANPEYSSLNLSQAAQVVAYECRVAALEAAGEVPAASAIGFHGDAASLAQIDGMYAHLEQALVAIDFLDADNPKKLMPRLKRLFSRTGLETEEVNILRGIARHILAVAKKAP
|
A0A6I1HHR1
IPR001537