A0A6I5NCP7 | AlphaKnot 2.0

AF4

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Information

Protein name	RNA methyltransferase
Main knot	3₁ (67%)
Global pLDDT	85.55
Species	Bifidobacterium choloepi
UniProt	A0A6I5NCP7
Structure Prediction Model	AlphaFold v4: A0A6I5NCP7
PDB structures	-
Model length	332
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.9	251-304	54	1-250, 305-332	250	28

Model Sequence

MQIIRVDSIDDERLAAYVNLTELQLRNRLEPEKGIFIAESPKVIDRALAAGREPLSLLVEEPWLEGMAGEFADIDAHWGPDVPVYVASPEQLRRLTGYRLHRGAIAAMRRWKLPTVTELLTRTRARRVAVLENIVDHTNVGAIMRSAAALDVDAVLVTPSCADPLYRRAARVSMGTVFQVPWTRIGGDDIARDETRRDRSHALREQASRDRSPITQAQIDDVVANGGADGKRAWPDAGLAELHGLGFTTAAMALTDDSISLQALTDRLELPADDPDYVDKLALIFGTEGDGLSRRTIAHADLTVKIPMSHGVDSLNVAASSAVAFYATRVRD

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (71%)
Global pLDDT	86.77
Species	Bifidobacterium choloepi
UniProt	A0A6I5NCP7
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	332
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					71.5	251-304	54	1-250, 305-332	250	28

Model Sequence

Comments

Domain	Bacteria
Family	Bifidobacteriaceae
Species (Full Name)	Bifidobacterium choloepi
Gene	F6S87_01100
PFAM codes	PF00588
InterPro codes	IPR001537, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A6I5NCP7F1

AF4

Model Sequence

ESM1

Model Sequence