A0A6J1I6N2F1

oligopeptide transporter 3-like
AF6
Categories voted by users:
Information
Protein name
oligopeptide transporter 3-like
Main knot
52 (65%)
Global pLDDT
85.7
Species
Pumpkin
UniProt
Structure Prediction Model
AlphaFold v6:  A0A6J1I6N2
PDB structures
-
Structure in AlphaLasso
  A0A6J1I6N2: LS3++-N
Model length
730
AlphaFold deposition date
2026-06-01
AlphaKnot deposition date
2026-07-09
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.11 52-681 630 1-51, 682-730 51 49 Knot
Model Sequence
MSNGSGELPSEERCLVEEVALVVPETDDPTLPVMTFRSWVLGLVSCCLLIFLNTFFTYRSQPLAISAILMQIVVLPIGRFMASTLPNRDFHFFRWKFSLNPGPFNMKEHVIITIFANCGISYGGGDAYSIGAITVMKAYYKQGLNFFLALLIVLTTQILGYGWAGMLRRYLVDPVEMWWPANLAQVSLFRALHETEDRSKGMTRMKFFLIFMGASFVYYVFPGYLLQILSFFSWVCWVWPRSITAQQIGSSQSGLGLGAFSFDWAGISAYHGSPLVSPWSSILNVGVGFVMFIYIVLPVCYWKFNTFDAHKFPIFSNKLFTRTGQKYDTTKVLTPEFELNVGAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDIWKQSRTAIKNAKVDIHAKLMQSYKQVPEWWFLILLFGSTVISLLMSIVWKDIVQLPWWGMLFAFAMAWIVTLPIGVIQATTNQQPGYDIIAQLIIGYILPGKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLVGTLVAGTINLVVAWWMLDNIENICDTEALQPDSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGLYRNLVWLFLIGAVLPVPIWALSKAFPKKKWIALINIPVISYGFAGMPPATPTNIASWLITGTIFNYFVFRHHKRWWQKYNYVLSAALDAGTALMGVLLFIVLQNGGHSLRWWGSQPDHCPLAKCPTAPGIVVKGCPVF
Comments
AF4
Categories voted by users:
Information
Protein name
oligopeptide transporter 3-like
Main knot
52 (63%)
Global pLDDT
85.97
Species
Pumpkin
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6J1I6N2
PDB structures
-
Structure in AlphaLasso
  A0A6J1I6N2: LS3++-N
Model length
730
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.4 122-675 554 1-121, 676-730 121 55
Model Sequence
MSNGSGELPSEERCLVEEVALVVPETDDPTLPVMTFRSWVLGLVSCCLLIFLNTFFTYRSQPLAISAILMQIVVLPIGRFMASTLPNRDFHFFRWKFSLNPGPFNMKEHVIITIFANCGISYGGGDAYSIGAITVMKAYYKQGLNFFLALLIVLTTQILGYGWAGMLRRYLVDPVEMWWPANLAQVSLFRALHETEDRSKGMTRMKFFLIFMGASFVYYVFPGYLLQILSFFSWVCWVWPRSITAQQIGSSQSGLGLGAFSFDWAGISAYHGSPLVSPWSSILNVGVGFVMFIYIVLPVCYWKFNTFDAHKFPIFSNKLFTRTGQKYDTTKVLTPEFELNVGAYNNYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDIWKQSRTAIKNAKVDIHAKLMQSYKQVPEWWFLILLFGSTVISLLMSIVWKDIVQLPWWGMLFAFAMAWIVTLPIGVIQATTNQQPGYDIIAQLIIGYILPGKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLVGTLVAGTINLVVAWWMLDNIENICDTEALQPDSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGLYRNLVWLFLIGAVLPVPIWALSKAFPKKKWIALINIPVISYGFAGMPPATPTNIASWLITGTIFNYFVFRHHKRWWQKYNYVLSAALDAGTALMGVLLFIVLQNGGHSLRWWGSQPDHCPLAKCPTAPGIVVKGCPVF
Comments
Domain Eukaryota
Family Cucurbitaceae
Species (Full Name) Cucurbita maxima (Pumpkin) (Winter squash)
Gene LOC111471641
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
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