A0A6J4L0W5 | AlphaKnot 2.0

AF4

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Information

Protein name	Integral membrane protein
Main knot	5₂ (63%)
Global pLDDT	77.89
Species	uncultured Gemmatimonadetes
UniProt	A0A6J4L0W5
Structure Prediction Model	AlphaFold v4: A0A6J4L0W5
PDB structures	-
Model length	371
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.6	22-244	223	1-21, 245-371	21	127

Model Sequence

MPPLKAAVRADGSVAFGGRFSVSFQRTLRVPEGTGAGRLPPGLGALPVLAVDDYAPRVPAAWRERGGVFVPLHPREALWLGFDSPSWHPHAVKVGVGGVNALTGGPWSPSLGAGPQDYLVCPPQLWLDGISTAAGEVRQLVAAPLGRGYTVEAQVTGRERSGGLQLVVYPPRPGRFPEEPPPPREADLPPGAGMLGAPPAAAFAAGPVEMGIAAGGRIEQKVYPDPHGADTWDASAGAALWVHLLNAEQFQAVTGRPPPPSPVSARTYTEHGFPWFELVDEGEEDLGRSELDRVRPLSELEREAGEGDAEEPFEIPDGQVVRLHRGDGGDFQIEAVHACTEMVLPEALQGEAEIVALDERPDNAEARHSGP

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	5₂ (53%)
Global pLDDT	67.78
Species	uncultured Gemmatimonadetes
UniProt	A0A6J4L0W5
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	371
ESM generation time	2023-06-27: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.0	22-346	325	1-21, 347-371	21	25

Model Sequence

Comments

Domain	Bacteria
Family	environmental samples
Species (Full Name)	uncultured Gemmatimonadetes bacterium
Gene	AVDCRST_MAG89-1579
PDB structures (whole Protein)	-

A0A6J4L0W5F1

AF4

Model Sequence

ESM1

Model Sequence