A0A6J4R4D0 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Halocarboxylic acid dehydrogenase DehI
Main knot	6₁ (46%)
Global pLDDT	94.0
Species	uncultured Rubrobacteraceae
UniProt	A0A6J4R4D0
Structure Prediction Model	AlphaFold v4: A0A6J4R4D0
PDB structures	-
Model length	303
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.5	74-277	204	1-73, 278-303	73	26

Model Sequence

MEQFSRDRAGDVERGLRLIPHLGEVMPDEANEEINAIYEGVRTHLRVPFVNFIFRVLANYPPYLSFAWTKIEPHLLTLRFEEAADTLRARALVEPIPEGTDWGSLGDLGQIRGFTDTIHYVLPKLLLIVSAFDEGLGGERGGRDSQPEAGVQPGVAEGTTSLKMVTSEEATGRVGEIFQEIRERHGHPDAASYYRGIAQWPEFLDAAWERLSTLIGTASYEERKHALLEEARSIVLELPLPRRDEALERGLEEEQIEEVRAILAVFRFRVISDMFLDVSLIKAMLDGPEAARSSRFSFAHGCG

Comments

ESM1

Categories voted by users:

Information

Protein name	Halocarboxylic acid dehydrogenase DehI
Main knot	6₁ (59%)
Global pLDDT	90.6
Species	uncultured Rubrobacteraceae
UniProt	A0A6J4R4D0
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	303
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					93.0	74-277	204	1-73, 278-303	73	26

Model Sequence

Comments

Domain	Bacteria
Family	Rubrobacteraceae
Species (Full Name)	uncultured Rubrobacteraceae bacterium
Gene	AVDCRST_MAG14-2461
PFAM codes	PF10778
InterPro codes	IPR019714, IPR029032
PDB structures (whole Protein)	-

A0A6J4R4D0F1

AF4

Model Sequence

ESM1

Model Sequence