A0A6J5GLH3F1

HTH asnC-type domain-containing protein
AF4
Categories voted by users:
Information
Protein name
HTH asnC-type domain-containing protein
Main knot
41 (70%)
Global pLDDT
89.57
Species
Paraburkholderia caffeinitolerans
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6J5GLH3
PDB structures
-
Model length
314
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
90.3 57-307 251 1-56, 308-314 56 7
Model Sequence
MENNRPDKLDFDIIRQLREDGRRPAKTIAQALGVTEATVTSRIHALSDASVMRVMAQRNVEYLRTRLFCFIQVWIRGRSAEAVADDIAAFAGAGSVMMMVGSPEIHVTALVEDNDDLLVLLQDHIGQVSGVDRLDVSVTLKAYKYRYDVVSLSPALSLGEPQGDPLDDDIVRQLQMDGRISNREIGRVLGISASTIRERVNRMLTTKQIRIGAVCDYRSMGFEIAAIAYLQVAADQFKTALNYLVAQHEVGQVSAISGRSNIFVILSGRNFDHLSEIVRNKLQTVPGVIETSVSLVARPKKHRADLISLVEPPG
Comments
ESM1
Categories voted by users:
Information
Protein name
HTH asnC-type domain-containing protein
Main knot
01 (86%)
Species
Paraburkholderia caffeinitolerans
UniProt
Structure Prediction Model
PDB structures
-
Model length
314
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Model Sequence
MENNRPDKLDFDIIRQLREDGRRPAKTIAQALGVTEATVTSRIHALSDASVMRVMAQRNVEYLRTRLFCFIQVWIRGRSAEAVADDIAAFAGAGSVMMMVGSPEIHVTALVEDNDDLLVLLQDHIGQVSGVDRLDVSVTLKAYKYRYDVVSLSPALSLGEPQGDPLDDDIVRQLQMDGRISNREIGRVLGISASTIRERVNRMLTTKQIRIGAVCDYRSMGFEIAAIAYLQVAADQFKTALNYLVAQHEVGQVSAISGRSNIFVILSGRNFDHLSEIVRNKLQTVPGVIETSVSLVARPKKHRADLISLVEPPG
Comments
Domain Bacteria
Family Burkholderiaceae
Species (Full Name) Paraburkholderia caffeinitolerans
Gene LMG28688_05301
PFAM codes  PF01037,  PF13404
InterPro codes  IPR000485,  IPR011008,  IPR019887,  IPR019888,  IPR036388,  IPR036390
PDB structures (whole Protein) -
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