A0A6J6VWI2 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193)
Main knot	3₁ (80%)
Global pLDDT	93.2
Species	freshwater metagenome
UniProt	A0A6J6VWI2
Structure Prediction Model	AlphaFold v4: A0A6J6VWI2
PDB structures	-
Model length	240
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.9	163-213	51	1-162, 214-240	162	27

Model Sequence

MLPLFIVNDLPTLVGANYTLGGDDGHHGARVLRIQVGEQLLLTDGEGSWSRTQVLEVGKKSLDLSVIETGFETALPTTITVVQALPKSDRAKEAIELMTQAGADHIVLWNAERSIGRAEKGVDKLRVVAHEASKQSRRFRIPRIEGVSTTAQVVELVRGSDLAIVLHEESDIKLSTLFPTAHAISSAVIVVGPEGGLTETEVTLFQQADAHICLLGRPILRSAHAGIAAISALNTGLKIW

Comments

ESM1

Categories voted by users:

Information

Protein name	16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193)
Main knot	3₁ (81%)
Global pLDDT	94.84
Species	freshwater metagenome
UniProt	A0A6J6VWI2
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	240
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					97.8	163-213	51	1-162, 214-240	162	27

Model Sequence

Comments

Domain	Unclassified
Family	ecological metagenomes
Species (Full Name)	freshwater metagenome
Gene	UFOPK2931_00496
PFAM codes	PF04452
InterPro codes	IPR006700, IPR015947, IPR029026, IPR029028
PDB structures (whole Protein)	-

A0A6J6VWI2F1

AF4

Model Sequence

ESM1

Model Sequence