A0A6L5END1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (87%)
Global pLDDT	94.22
Species	Corynebacterium sp
UniProt	A0A6L5END1
Structure Prediction Model	AlphaFold v4: A0A6L5END1
PDB structures	-
Model length	289
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					94.4	196-239	44	1-195, 240-289	195	50

Model Sequence

MPLDFSAPFTERTPRIVAAAKLHRPAARRKVRAFLVEGENAVEAAVTTGSATDVYVTERAAHRCAEIVKSAQYLNVYVHPISDKAARSLTDMVTPTGIFAVCSPVLWPMRRALASSPRLVSVPVATADPGNAGTLIRVSDAVGADAVVFAGETVDPQGAKVVRASAGSLFHLPVVREPMVEAVLDSLRDRGLQILATAADGEVDLDHAEDLLAAPTAWLFGNEAHGLGKELLAQADHRVRIPLRGRAESLNLATAASICLYESARAQARAAGYTELVNLEEKAERVHGG

Comments

ESM1

Categories voted by users:

Information

Protein name	RNA methyltransferase
Main knot	3₁ (81%)
Global pLDDT	95.2
Species	Corynebacterium sp
UniProt	A0A6L5END1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	289
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					95.1	196-239	44	1-195, 240-289	195	50

Model Sequence

Comments

Domain	Bacteria
Family	Corynebacteriaceae
Species (Full Name)	Corynebacterium sp. zg331
Gene	GCO27_09980
PFAM codes	PF00588, PF08032
InterPro codes	IPR001537, IPR013123, IPR029026, IPR029028, IPR029064
PDB structures (whole Protein)	-

A0A6L5END1F1

AF4

Model Sequence

ESM1

Model Sequence