| Protein name |
Integral membrane protein
|
| Main knot |
75 (55%)
|
| Global pLDDT |
80.21
|
| Species |
bacterium SGD-2
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6M1UI55
|
| PDB structures |
-
|
| Model length |
322
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
82.0 | 26-233 | 208 | 1-25, 234-322 | 25 | 89 |
|
Model Sequence |
MALALEKDRLVFEFPEVHPAARMAVSFHRTLRVPDDGNTYPLPPGLGRFPLRTVAELDEAALPSSWRSHGGLVMPMWQAEACWLGFESRYPFLVKVGAGDVDALTGEPWSPEPDFGREDYLEVPAQPWLDGYVVAHGRVRQFVAMPLGSGYSLEEQLRSGPARGGIRVAARPMRAQRWEERAGFDARRPLPAFAPAPAMGLGAGGSVDQGVATPVESHDAWDLDHRSVVEVHLVNSEQWRAITDQDPPTRPPAASDYTARGFPWFELYDETVARQGAAPLADVDTVADVGRRRGEPLPDNETVTVPEPVRIRPAPREPGRRG
|
| Protein name |
Integral membrane protein
|
| Main knot |
01 (89%)
|
| Species |
bacterium SGD-2
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
322
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
Model Sequence |
MALALEKDRLVFEFPEVHPAARMAVSFHRTLRVPDDGNTYPLPPGLGRFPLRTVAELDEAALPSSWRSHGGLVMPMWQAEACWLGFESRYPFLVKVGAGDVDALTGEPWSPEPDFGREDYLEVPAQPWLDGYVVAHGRVRQFVAMPLGSGYSLEEQLRSGPARGGIRVAARPMRAQRWEERAGFDARRPLPAFAPAPAMGLGAGGSVDQGVATPVESHDAWDLDHRSVVEVHLVNSEQWRAITDQDPPTRPPAASDYTARGFPWFELYDETVARQGAAPLADVDTVADVGRRRGEPLPDNETVTVPEPVRIRPAPREPGRRG
|
| Domain |
Bacteria
|
| Family |
unclassified Bacteria
|
| Species (Full Name) |
bacterium SGD-2
|
| Gene |
G5B41_02205
|
| PDB structures (whole Protein) |
-
|
A0A6M1UI55