| Protein name |
LPD25 domain-containing protein
|
| Main knot |
81 (74%)
|
| Global pLDDT |
71.42
|
| Species |
Bacillus megaterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
A0A6M6E893
|
| PDB structures |
-
|
| Model length |
365
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
74.3 | 28-316 | 289 | 1-27, 317-365 | 27 | 49 |
|
Model Sequence |
MSFEETFEEYINHYTAHKEKEIKLKVIKDAIKAHYNNQEERLLKVNGVVARLKTKKEYRVKEDIYEYLEDYGYLPLVVSVNKSLEKQFNLSSAKTNHKSSVRLYTGGKAIVDTEVIASKYNYFQSYDLEKLSDEFKRSFTEEKLAKASLEEVKEQLKEEMPGNSISTDYGTLKLTETYDFDMNAVFDRVSKNKEAFIKMLEQNVYEVIIFPEETRILMSGNDFLGEQTVEVLYNKPNVKLESLFVKKRAFNQYKKDGYVLSHFEIDIDPFEFFKTCKVSKTKINDLIQQGIIPEKDIEPFLEVVGETEFIEVLNEGSVEQQSNLHHQKLIERSQKYRSNTEEHYVVDNSLPSPTNIKIDIEDFNF
|
| Protein name |
LPD25 domain-containing protein
|
| Main knot |
81 (66%)
|
| Global pLDDT |
71.96
|
| Species |
Bacillus megaterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
365
|
| ESM generation time |
2023-06-25: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
92.5 | 25-310 | 286 | 1-24, 311-365 | 24 | 55 |
|
Model Sequence |
MSFEETFEEYINHYTAHKEKEIKLKVIKDAIKAHYNNQEERLLKVNGVVARLKTKKEYRVKEDIYEYLEDYGYLPLVVSVNKSLEKQFNLSSAKTNHKSSVRLYTGGKAIVDTEVIASKYNYFQSYDLEKLSDEFKRSFTEEKLAKASLEEVKEQLKEEMPGNSISTDYGTLKLTETYDFDMNAVFDRVSKNKEAFIKMLEQNVYEVIIFPEETRILMSGNDFLGEQTVEVLYNKPNVKLESLFVKKRAFNQYKKDGYVLSHFEIDIDPFEFFKTCKVSKTKINDLIQQGIIPEKDIEPFLEVVGETEFIEVLNEGSVEQQSNLHHQKLIERSQKYRSNTEEHYVVDNSLPSPTNIKIDIEDFNF
|
| Domain |
Bacteria
|
| Family |
Bacillaceae
|
| Species (Full Name) |
Priestia megaterium (Bacillus megaterium)
|
| Gene |
FDZ14_31655
|
| PDB structures (whole Protein) |
-
|