A0A6M8VEA3 | AlphaKnot 2.0

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Information

Protein name	YbbR-like domain-containing protein
Main knot	5₁ (94%)
Global pLDDT	84.3
Species	Ignavibacteriae bacterium
UniProt	A0A6M8VEA3
Structure Prediction Model	AlphaFold v4: A0A6M8VEA3
PDB structures	-
Model length	119
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					98.0	52-109	58	1-51, 110-119	51	10

MSKADGYFFFSVRFFFFVLIFFASANTVYSQEKNKIDFESCTYNGFPLYGKIKFVESFPDIKVQLVDSFPDLKVKIVSSFPDDCGEWQIVESFPDVKIKIVESFPDIKIKFVESFPGKP

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Categories voted by users:

Information

Protein name	YbbR-like domain-containing protein
Main knot	0₁ (95%)
Species	Ignavibacteriae bacterium
UniProt	A0A6M8VEA3
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	119
ESM generation time	2023-06-22: download the generated 3D model
AlphaKnot deposition date	2023-06-28

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MSKADGYFFFSVRFFFFVLIFFASANTVYSQEKNKIDFESCTYNGFPLYGKIKFVESFPDIKVQLVDSFPDLKVKIVSSFPDDCGEWQIVESFPDVKIKIVESFPDIKIKFVESFPGKP

Comments

Domain	Bacteria
Family	unclassified Ignavibacteriae
Species (Full Name)	Ignavibacteriae bacterium
Gene	HND40_08945
PDB structures (whole Protein)	-

A0A6M8VEA3F1