A0A6N2K7A9F1

Polygalacturonase
AF4
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Information
Protein name
Polygalacturonase
Main knot
Unknown (100%)
Global pLDDT
81.06
Species
Common osier
UniProt
Structure Prediction Model
AlphaFold v4:  A0A6N2K7A9
PDB structures
-
Structure in AlphaLasso
  A0A6N2K7A9: L0  L-1N
Model length
751
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
74.7 172-541 370 1-171, 542-751 171 210
Model Sequence
MASLPLPITILFIIFLASSPSARAAQFSVLSYGAKPGGRTDSAKAFAAAWSQACASTGPATIYVPKGSFSLGQVKFQGPCKNNAILVRIDGTLVAPSDYKVIGSAENWLIFEHVNGVTLSGGILDGQGAGLWSCKKSGKGGCPRGATSLEFTNSKNIAITGLTSLNSQMFHIVINGCQNVKVQGVKVSADGNSPNTDGIHVQLSTAVTILNSRIGTGDDCVSIGPEAGVQDVTVKTTTFTGTQNGLRIKTWGRPSTGFARNILFQHAVMNNVQNPILIDQNYCPGEKNCPGQVSGVKVSDVTYQDIHGTSATELAVKFDCSKKYPCTGIKLQDVKLTYDNKPAEALCSHAGGVASGTYYPIPERPMAVLPLPTIPRRITLFSIIFLAFLALAKAERYSVLSYGAKPDGRTDSTKAFAAAWSRACASTKPATISVPQGRFYLGQVRFQGPCKNHAILLRIDGTLVAPSDYKVIGNAKNWLIFENVNGVTVSGGTLDGQGAGLWSCKKSGKGSCPSGATSLEFSNSNNILFHIVILGCQNVKVQGVKVSAAGNSPNTDGIHVQSSTGVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKESHEAGVQNVTVKTTTFTGTQNGLRIKSWGRPSNGFARDILFQHAVMNNVQNPILIDQNYCPGEKNCPGQDSGVRISGVSYQDIHGSSATEVAVKFDCSKKYPCTGIKLQDVRLTYKNQPAEASCSNTGGVASGLVQPTSCL
Comments
Domain Eukaryota
Family Salicaceae
Species (Full Name) Salix viminalis (Common osier) (Basket willow)
Gene SVIM_LOCUS43982
PFAM codes  PF00295
InterPro codes  IPR000743,  IPR006626,  IPR011050,  IPR012334
PDB structures (whole Protein) -