A0A6N8IZ52 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	3₁ (70%)
Global pLDDT	88.3
Species	Ramlibacter pinisoli
UniProt	A0A6N8IZ52
Structure Prediction Model	AlphaFold v4: A0A6N8IZ52
PDB structures	-
Model length	382
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.0	52-352	301	1-51, 353-382	51	30

Model Sequence

MARARWIRSPTWDLVWVLNALWLAPLVLLLERAYGDARNSPLDWLFFVLAVPLWFGHRISSAWLAYTTPGYRPLLRSQRRRFVALPLAIALACFGVLLAPDSVLPVPLEQRVVCLAVLDYLLVSHHFAAQHVGLLSLYRGRAGRPSDATTRRLDRWFALVVGGGFVVLANALAGSIAFQDRWIDPLLGEALSQTVVQALATGSLVLVLTLTALMLAVELRSPQPSVPRVAYVVSVATMVLLGFLHPFLFLVLWSVQHWSAAMGLTSLAASGGAQETGAHWQRWLAPVNRHGWSVLLVLAALSALLLPLLEVEAVGDDYVVADRLFGEAALWLRASPLVPALLALGFATSFIHYVLDRAAFRFSSPEVRQAARGLLERQGEAH

Comments

ESM1

Categories voted by users:

Information

Protein name	Integral membrane protein
Main knot	3₁ (67%)
Global pLDDT	72.72
Species	Ramlibacter pinisoli
UniProt	A0A6N8IZ52
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	382
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					76.6	52-353	302	1-51, 354-382	51	29

Model Sequence

Comments

Domain	Bacteria
Family	Comamonadaceae
Species (Full Name)	Ramlibacter pinisoli
Gene	GON04_20575
PDB structures (whole Protein)	-

A0A6N8IZ52F1

AF4

Model Sequence

ESM1

Model Sequence