| Protein name |
Sodium-dependent transporter
|
| Main knot |
41 (50%)
|
| Global pLDDT |
94.01
|
| Species |
Gemmatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 A0A6N8VBW8
|
| PDB structures |
-
|
| Model length |
267
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
95.0 | 21-263 | 243 | 1-20, 264-267 | 20 | 4 |
|
Model Sequence |
MSTRSAVFTTRWGMLLAMLGMAIGTGNIWRFPRIAASNGGGSFLVAWVVFLLLWSIPLLILEFGMGKGTRRGSIGSFVKTIGPKFAWMGAWIAWVAVAILFYYTVVMGWTIRFFFATVTGEIPTEMPGSFWDAFNSTPQAVGFHALAVGLGIFVVARGVRGIEKAARFLIPSLVILVVVLAIKALTLPGASEGLAFLFTPDFSELGDVRIWLEALTQNAWDTGAGWGLVLTYAVYMRSREDTALNAFVIGFGNNSMSLLAGIMVLCT
|
| Protein name |
Sodium-dependent transporter
|
| Main knot |
41 (48%)
|
| Global pLDDT |
92.22
|
| Species |
Gemmatimonadetes bacterium
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures |
-
|
| Model length |
267
|
| ESM generation time |
2023-06-23: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
90.7 | 23-267 | 245 | 1-22, | 22 | 0 |
|
Model Sequence |
MSTRSAVFTTRWGMLLAMLGMAIGTGNIWRFPRIAASNGGGSFLVAWVVFLLLWSIPLLILEFGMGKGTRRGSIGSFVKTIGPKFAWMGAWIAWVAVAILFYYTVVMGWTIRFFFATVTGEIPTEMPGSFWDAFNSTPQAVGFHALAVGLGIFVVARGVRGIEKAARFLIPSLVILVVVLAIKALTLPGASEGLAFLFTPDFSELGDVRIWLEALTQNAWDTGAGWGLVLTYAVYMRSREDTALNAFVIGFGNNSMSLLAGIMVLCT
|
A0A6N8VBW8
IPR000175